PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON42488.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

ERF

Protein Properties

Length: 430aa MW: 48316.1 Da PI: 4.8499

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON42488.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	58.1	2.1e-18	72	130	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpse..ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 ++++GVr++ +g+Wv+eIr+p + + k+ r +lg+f ta eAa a+++a+k+++g PON42488.1 72 CCFRGVRQRT-WGKWVSEIREPHSraTKssKKgSRLWLGTFATAIEAALAYDEAAKAMYG 130 689**999.******666354477557**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 430 aa Download sequence
MTMEAIDKNR KARKRRNNSD SVVDTLAKWK KYNHQLSSSS SLEGGQEYLK SPAKGSKKGC 60 MRGKGGPQNS DCCFRGVRQR TWGKWVSEIR EPHSRATKSS KKGSRLWLGT FATAIEAALA 120 YDEAAKAMYG PVALLNFPEN PAADSTGELT NETVPAESNE TGRVEEELNL VMKHNNNSIP 180 ENYDSLEEAG VVKGSLEKQD CFRDTKLNQG HDFSEAARIS EPSSNILNED MERHDFSAAA 240 RISEPSAKTL NEDMERHDFS AAARISEPSA NTLNEDMERH VKEIMLSNGY DGCSDNYACL 300 QNEHKSTGYY PELDFKLQKN VKVEKLENSC GSAGSSSGLD YLQKWATNET FVTDYWDHQS 360 ETPSSHPYYE LQTRDGDLSK SLNQMEETYL SSGYNFDFNF DFDFLRPGYD FGLSEEQGKL 420 DLWFPEQGGL

Sequence ? help Back to Top

Protein Sequence Length: 430 aa Download sequence

MTMEAIDKNR KARKRRNNSD SVVDTLAKWK KYNHQLSSSS SLEGGQEYLK SPAKGSKKGC  60
MRGKGGPQNS DCCFRGVRQR TWGKWVSEIR EPHSRATKSS KKGSRLWLGT FATAIEAALA  120
YDEAAKAMYG PVALLNFPEN PAADSTGELT NETVPAESNE TGRVEEELNL VMKHNNNSIP  180
ENYDSLEEAG VVKGSLEKQD CFRDTKLNQG HDFSEAARIS EPSSNILNED MERHDFSAAA  240
RISEPSAKTL NEDMERHDFS AAARISEPSA NTLNEDMERH VKEIMLSNGY DGCSDNYACL  300
QNEHKSTGYY PELDFKLQKN VKVEKLENSC GSAGSSSGLD YLQKWATNET FVTDYWDHQS  360
ETPSSHPYYE LQTRDGDLSK SLNQMEETYL SSGYNFDFNF DFDFLRPGYD FGLSEEQGKL  420
DLWFPEQGGL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38340.1	3e-30	ERF family protein