PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON39390.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | ERF | ||||||||
Protein Properties | Length: 247aa MW: 26484.3 Da PI: 8.4933 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.7 | 1.6e-19 | 35 | 84 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr ++ +gr++AeIrd ++ ++r++lg+f++a++Aa+a++aa++ l+g PON39390.1 35 RYRGVRKRP-WGRFAAEIRDpWK----KTRVWLGTFDSADDAARAYDAAARTLRG 84 69*******.**********883....5*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence |
MRRGRGATTG RGVAPATQAA APVGPGDGSG LKEVRYRGVR KRPWGRFAAE IRDPWKKTRV 60 WLGTFDSADD AARAYDAAAR TLRGPKAKTN FPASPYSLTP PFCYQNAGAP GGDPFADHRV 120 YGSAAGGGFQ DHHPHHQHHQ VDPQRPTSSS LSSTLESFSG PRPPPVSTAT IAPAVSSRRR 180 YPRTPPVVPE DCHSDCDSSS SVIDDVNGDI ASSSFRKTLP FDLNFPPLDE VEFAADGHDL 240 HCTALCL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G20310.1 | 5e-34 | ERF family protein |