PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON39185.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | WOX | ||||||||
Protein Properties | Length: 172aa MW: 19489.9 Da PI: 10.8745 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 64.1 | 1.9e-20 | 27 | 88 | 2 | 57 |
T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+t+t++q+++L+el+++ r p+ae++++++++l +++ ++V++WFqN++a+e++ PON39185.1 27 STRWTPTTDQIRILKELYYNngVRSPTAEQIQRISARLrqygKIEGKNVFYWFQNHKARERQ 88 58****************98678*************************************97 PP | |||||||
2 | Wus_type_Homeobox | 115.4 | 2.8e-37 | 26 | 90 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++tRWtPt++Qi+iL+ely+ +G+r+P++e+iqri+a+L++yGkie+kNVfyWFQN+kaRerqk+ PON39185.1 26 SSTRWTPTTDQIRILKELYYnNGVRSPTAEQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKK 90 789***************9779*****************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 172 aa Download sequence |
MEAQQNDDGG SSGGKGSTGG FLCRQSSTRW TPTTDQIRIL KELYYNNGVR SPTAEQIQRI 60 SARLRQYGKI EGKNVFYWFQ NHKARERQKK RFTTTTTTAS TTNDDNNQTP MQRGIMLPTA 120 WKPDHHQSFN HNIKYSPVVS STALNSSATS MLGGLKFNGQ LTRVMLRTWL IL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17950.1 | 2e-42 | WOX family protein |