PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON36967.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family BBR-BPC
Protein Properties Length: 315aa    MW: 36034.9 Da    PI: 10.0611
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON36967.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind359.28.4e-11013151301
   GAGA_bind   1 mdddgsre..rnkg.yye................pa.aslkenlglqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdn 79 
                 mdd  ++e  r+k  yy+                ++ ++l   +++++ms+iaerda+irern+alsek++a+aerd+af qrd+a+a+++ al+erdn
  PON36967.1   1 MDDRRQHEtsRHKVdYYRgthypvqwnmmaqhqvKEpNALV--MNKKIMSIIAERDAAIRERNVALSEKNEALAERDEAFRQRDEAFAQKDSALMERDN 97 
                 67766665668888888899999999999877663335666..99****************************************************** PP

   GAGA_bind  80 kllalllvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkv 178
                 +++al+ +  s  ++ p + +v +g+k +++  + + p+++d +++ +e+++++a+pi+   +ea +++++k+r+++k   +k++k+++kk +++ ++ 
  PON36967.1  98 AFAALQIRIGS--MNIPLSDGVQRGVKRMNHPSN-NLPNMADATYDSKEMQITDAFPITVISSEAIKSRQEKRRKENKGISSKESKSPRKKVAEDLNRR 193
                 *******8776..6788999999*******8887.88***************************99999999999888888888887777655554444 PP

   GAGA_bind 179 kkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGy 277
                 +++   ++ ++e++s+dl+ln +++Dest+PvPvCsCtG++rqCYkWG+GGWqS+CCtt +SvyPLP+ +++r+aR++grKmS+++f++lL++Laa+G+
  PON36967.1 194 ATSD-GTKFRTEWESQDLGLNLITFDESTMPVPVCSCTGVPRQCYKWGSGGWQSSCCTTHMSVYPLPQIPNKRHARMGGRKMSGSVFTRLLSRLAAQGH 291
                 4333.479******************************************************************************************* PP

   GAGA_bind 278 dlsnpvDLkdhWAkHGtnkfvtir 301
                 dls p+DL+++WA+HGtn+++ti+
  PON36967.1 292 DLSMPLDLREYWARHGTNRYITIK 315
                 ***********************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MDDRRQHETS RHKVDYYRGT HYPVQWNMMA QHQVKEPNAL VMNKKIMSII AERDAAIRER  60
NVALSEKNEA LAERDEAFRQ RDEAFAQKDS ALMERDNAFA ALQIRIGSMN IPLSDGVQRG  120
VKRMNHPSNN LPNMADATYD SKEMQITDAF PITVISSEAI KSRQEKRRKE NKGISSKESK  180
SPRKKVAEDL NRRATSDGTK FRTEWESQDL GLNLITFDES TMPVPVCSCT GVPRQCYKWG  240
SGGWQSSCCT THMSVYPLPQ IPNKRHARMG GRKMSGSVFT RLLSRLAAQG HDLSMPLDLR  300
EYWARHGTNR YITIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G21240.11e-129BBR-BPC family protein