PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON36886.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

NAC

Protein Properties

Length: 367aa MW: 41370.9 Da PI: 8.1866

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON36886.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	172.6	1.2e-53	8	139	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.... 95 lppGfrFhPtdeel+ +yL+k+v++++l++ ++i+evdiyk++Pw+Lp+k++ +ekewyfFs+rd+ky++g r+nra++sgyWkatg+dk++++ PON36886.1 8 LPPGFRFHPTDEELILHYLRKRVTSTPLPV-SIIAEVDIYKFDPWELPAKAAFGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKTIVTPvaag 105 79**************************.89***********988899************************************99999 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++++g+kk Lvfykgr pkg+kt+W+mheyrl PON36886.1 106 gGHRNIGVKKALVFYKGRPPKGVKTNWIMHEYRL 139 88889*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 367 aa Download sequence
MKNPQTNLPP GFRFHPTDEE LILHYLRKRV TSTPLPVSII AEVDIYKFDP WELPAKAAFG 60 EKEWYFFSPR DRKYPNGARP NRAAASGYWK ATGTDKTIVT PVAAGGGHRN IGVKKALVFY 120 KGRPPKGVKT NWIMHEYRLA ETPTYAYSNI NKPNKLKDSS MRLDDFVLCR IYKKTNVVHP 180 TATIPSDQEE EEQFIQEALL PCLKGDQENS INMPQKSSSF SNLLDAMDYS ILSSLLSECP 240 SNSTGFDQSI STGFNTGTST STTLDQCFFV NGCTSNSISS SYYMQLPNKL PQLQFPAPTS 300 VENRLKRQLS SPDDQHDLLC PPKKCMNTCS FINSTIQSDN YVPQNTLMNQ LFLNQQLFLS 360 PELQFQG

Sequence ? help Back to Top

Protein Sequence Length: 367 aa Download sequence

MKNPQTNLPP GFRFHPTDEE LILHYLRKRV TSTPLPVSII AEVDIYKFDP WELPAKAAFG  60
EKEWYFFSPR DRKYPNGARP NRAAASGYWK ATGTDKTIVT PVAAGGGHRN IGVKKALVFY  120
KGRPPKGVKT NWIMHEYRLA ETPTYAYSNI NKPNKLKDSS MRLDDFVLCR IYKKTNVVHP  180
TATIPSDQEE EEQFIQEALL PCLKGDQENS INMPQKSSSF SNLLDAMDYS ILSSLLSECP  240
SNSTGFDQSI STGFNTGTST STTLDQCFFV NGCTSNSISS SYYMQLPNKL PQLQFPAPTS  300
VENRLKRQLS SPDDQHDLLC PPKKCMNTCS FINSTIQSDN YVPQNTLMNQ LFLNQQLFLS  360
PELQFQG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04070.1	1e-109	NAC family protein