PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON35684.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | MYB_related | ||||||||
Protein Properties | Length: 143aa MW: 16327.6 Da PI: 10.4446 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 47.8 | 3.3e-15 | 52 | 95 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++ +eE++ + +++k+lG++ W+ Ia +++ gRt++++k++w++ PON35684.1 52 RGNFGPEEEDVISKLHKLLGNR-WAFIAGYLP-GRTDNEIKNYWHT 95 89********************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 143 aa Download sequence |
MAKDNGDTFL KEQRKKELSI LSSIISYVQG SRDVLKSCRL RWLNYRRPGI KRGNFGPEEE 60 DVISKLHKLL GNRWAFIAGY LPGRTDNEIK NYWHTKLSKL KPKPSSSAPA ESNNAPKPSP 120 TNESSEEPNL TKKQHQICKP QTH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G06180.1 | 2e-29 | MYB family protein |