PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON35339.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB

Protein Properties

Length: 321aa MW: 34275.7 Da PI: 8.8063

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON35339.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	62.5	8.5e-20	12	57	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEde l ++v+++G ++W++I++ ++ gR++k+c++rw + PON35339.1 12 KGPWSPEEDEALQKLVQKHGARNWSLISKSIP-GRSGKSCRLRWCNQ 57 79****************************.*********985 PP
2	Myb_DNA-binding	54	3.8e-17	66	108	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +++++Ede +++a++++G++ W+tIar ++ gRt++ +k++w++ PON35339.1 66 AFSPDEDETIIRAHARFGNK-WATIARLLN-GRTDNAIKNHWNST 108 79****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 321 aa Download sequence
MAVSRKEMDR IKGPWSPEED EALQKLVQKH GARNWSLISK SIPGRSGKSC RLRWCNQLSP 60 QVEHRAFSPD EDETIIRAHA RFGNKWATIA RLLNGRTDNA IKNHWNSTLK RKCSTMFEDC 120 NDGLGGGGYD GNYPQPLKRS VSAGSALPVS TGLYMNPGSP SGSDVSDSSV PHAAVSPSHV 180 YRPVARAGAV LPLVETASSS NDPATSLSLS LPGVDSCEVS NRVAESIQNS SSSPATAVMN 240 LLPAISPAPA PTLPASGGEG ENGVFVPFSK ELLAVMQEMI RKEVRSYMAG LEQNGACLPP 300 RGAVDGFRNV AVKRIGISKI E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37260.1	2e-97	MYB family protein