PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON34847.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | ERF | ||||||||
Protein Properties | Length: 221aa MW: 23928.6 Da PI: 9.9928 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 66 | 7.3e-21 | 25 | 75 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 +y+GVr ++ +gr++AeIrdp++ + r++lg+f+taeeAaka++aa+++++g+ PON34847.1 25 HYRGVRKRP-WGRYAAEIRDPTK---KSRVWLGTFDTAEEAAKAYDAAAREFRGA 75 69*******.**********864...6*************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 221 aa Download sequence |
MALKERMGVK KATNNNNNNR SIEMHYRGVR KRPWGRYAAE IRDPTKKSRV WLGTFDTAEE 60 AAKAYDAAAR EFRGAKAKTN FPRPSSAADS RSPSQSSTVE SSGNGNELPQ RNSTRRFGGG 120 GGAVFPFLQQ EAAAAYGEVH AGSFMPTRHP VLFFDALSRG EFVTPVYPVR FDPGTVEFAV 180 GSGGGAQIQS ESDSSSVVEG QPKRVVLDLD LNLAPPGEAY I |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G44210.1 | 1e-31 | ERF family protein |