PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON34683.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB_related

Protein Properties

Length: 698aa MW: 76995.5 Da PI: 9.8523

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON34683.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	37.6	5e-12	12	64	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.......TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg.......kgRtlkqcksrwqkyl 48 W t+E++ll++av+++G ++W+++a ++ + +t+ +ck+++++++ PON34683.1 12 TWGTWEELLLACAVHRYGIDSWDSVATELRkrtsiphLLLTPHSCKHKYHDLK 64 6**********************************99********9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 698 aa Download sequence
MAKPNFPEKQ TTWGTWEELL LACAVHRYGI DSWDSVATEL RKRTSIPHLL LTPHSCKHKY 60 HDLKRRFARN DVVSAPSDEK DDGAAIAASI PFLDELRRLR VAELRREVER YDISIVSLET 120 KVEKLKEERE QSLKGPEKPD LEKESKDDDE EEEETVRSEG ASRDNMADKA VSGGGSVYDE 180 SNSTNLKGEA LPGPEPATSP PIPAEPASAA AGELDRVREY GKLAVEDSYN GSSETIGKES 240 AAVSPVQESE KVLSEKNGGG DSAESKEEEE GTKEVCSSEM QSSTSLSRKK KVEESDEPED 300 QSVDTKRAPI ESQSLIDFLE ILRSHKPGSF FERRLEIQGT PKYINTIRQH MDFGMVRNRL 360 EEGWYSGCKS KFFRDLLLIF NNAIVFLGRK SPETKAAIEL RHLLLKEMAL KTTTKRDSLP 420 KDETGALPSK KEPEEQEQPS EMLLRKSKLS VPMNACRKRS SITARASTSS SGAERKKEQT 480 NALLDVKSAM SWKQSDKSSS DKADEFSGTK KKRKDRFRTG TRNSSNKNGT SRSSTEINKN 540 SCSNTNVGTS SRGASNENSA SKATDKEKNN SSSTASGKKR SATNFLNRMK RSSSSNNGSL 600 LETLKDSDNS SRGGAEQKKN GAGKGSNSSS RQKEQASRRT SGSKQAKEPE SPAKRSVGRP 660 SKRTASVAAE AVVPAKRSRQ SVENEALAPR NAKKRSRK

Sequence ? help Back to Top

Protein Sequence Length: 698 aa Download sequence

MAKPNFPEKQ TTWGTWEELL LACAVHRYGI DSWDSVATEL RKRTSIPHLL LTPHSCKHKY  60
HDLKRRFARN DVVSAPSDEK DDGAAIAASI PFLDELRRLR VAELRREVER YDISIVSLET  120
KVEKLKEERE QSLKGPEKPD LEKESKDDDE EEEETVRSEG ASRDNMADKA VSGGGSVYDE  180
SNSTNLKGEA LPGPEPATSP PIPAEPASAA AGELDRVREY GKLAVEDSYN GSSETIGKES  240
AAVSPVQESE KVLSEKNGGG DSAESKEEEE GTKEVCSSEM QSSTSLSRKK KVEESDEPED  300
QSVDTKRAPI ESQSLIDFLE ILRSHKPGSF FERRLEIQGT PKYINTIRQH MDFGMVRNRL  360
EEGWYSGCKS KFFRDLLLIF NNAIVFLGRK SPETKAAIEL RHLLLKEMAL KTTTKRDSLP  420
KDETGALPSK KEPEEQEQPS EMLLRKSKLS VPMNACRKRS SITARASTSS SGAERKKEQT  480
NALLDVKSAM SWKQSDKSSS DKADEFSGTK KKRKDRFRTG TRNSSNKNGT SRSSTEINKN  540
SCSNTNVGTS SRGASNENSA SKATDKEKNN SSSTASGKKR SATNFLNRMK RSSSSNNGSL  600
LETLKDSDNS SRGGAEQKKN GAGKGSNSSS RQKEQASRRT SGSKQAKEPE SPAKRSVGRP  660
SKRTASVAAE AVVPAKRSRQ SVENEALAPR NAKKRSRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57980.1	5e-49	MYB_related family protein