PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON34376.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | GeBP | ||||||||
Protein Properties | Length: 248aa MW: 29460.5 Da PI: 9.2382 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 66.9 | 4.4e-21 | 78 | 173 | 2 | 98 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsd.didafyefvkksi.sfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWgs 98 f+r ws++ e+v+L+ l+ f++k++ +ps +++fy ++kk i ++++ k ql +K+r++K Kf++k++k + + + + dq if+lsk iWgs PON34376.1 78 PFKRFWSQKHELVILKHLLRFAEKKKCKPSGvKMSKFYVYLKKIItDLDFDKIQLGDKVRKMKIKFENKMRK---KPDSVYPDKRDQRIFQLSKEIWGS 173 599************************99988***********99459***********************9...888999****************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence |
MEDDLHPHLQ NEENLHDDHQ LGLNGNQNNH HHDVESASGV ERAAWKRRRV GNDDADQAMA 60 QDWDAAFDEV NDNYKLQPFK RFWSQKHELV ILKHLLRFAE KKKCKPSGVK MSKFYVYLKK 120 IITDLDFDKI QLGDKVRKMK IKFENKMRKK PDSVYPDKRD QRIFQLSKEI WGSEMRAATK 180 NVTSRPEESI QKEFAELVNQ MSFNKNSLLD GLAMMIETPM KAELVRNWQI LHAEYFRNRW 240 NIEEKVFS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 46 | 50 | KRRRV |
2 | 135 | 150 | KVRKMKIKFENKMRKK |
3 | 137 | 151 | RKMKIKFENKMRKKP |
4 | 138 | 150 | KMKIKFENKMRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G11510.1 | 3e-10 | GeBP family protein |