PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON33673.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB_related

Protein Properties

Length: 443aa MW: 49007.1 Da PI: 7.2009

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON33673.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.3	3e-17	30	74	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +WT+eE+e++++a k++G g W+ I +++g ++t+ q++s+ qk+ PON33673.1 30 REKWTEEEHEKFLEALKLYGRG-WRQIEEHVG-TKTAVQIRSHAQKF 74 789*****************.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 443 aa Download sequence
MVVEGEGMGL KEMYDSATKV RKPYTITKQR EKWTEEEHEK FLEALKLYGR GWRQIEEHVG 60 TKTAVQIRSH AQKFFSKLVR GSTESVEGSM QPIEIPPPRP KKKPMHPYPR KSVDSLNVSV 120 LNQSERSPSP NFTRSVKGLK SPTSVLSTHG SDALGSAASD QHSRSPSSMS CTTDIQLISL 180 SPSEKENDHL LSNSSTDEQL SLPTNGISAC STLENMLSVK FESCAKDTEH TKEEAKLSAS 240 TSFKLFGRTV FLSDLGREPP SGVQVSKTLK ADQGLVLKLS LDQLDTDLSL GGVVSDCNPL 300 ECVASIKPLE QRKESSNVVK ADASMLWWSS YQLPFHYVVT YNSSIDQISP NSCAEEKMED 360 KEAQKERSCS DSNEDSTTGA ETLGGKNIEA VKPFSQELRT RGSVEPCNSR KGFVPYKRCL 420 AERDNGSSVI ISNDRERQKI RVC

Sequence ? help Back to Top

Protein Sequence Length: 443 aa Download sequence

MVVEGEGMGL KEMYDSATKV RKPYTITKQR EKWTEEEHEK FLEALKLYGR GWRQIEEHVG  60
TKTAVQIRSH AQKFFSKLVR GSTESVEGSM QPIEIPPPRP KKKPMHPYPR KSVDSLNVSV  120
LNQSERSPSP NFTRSVKGLK SPTSVLSTHG SDALGSAASD QHSRSPSSMS CTTDIQLISL  180
SPSEKENDHL LSNSSTDEQL SLPTNGISAC STLENMLSVK FESCAKDTEH TKEEAKLSAS  240
TSFKLFGRTV FLSDLGREPP SGVQVSKTLK ADQGLVLKLS LDQLDTDLSL GGVVSDCNPL  300
ECVASIKPLE QRKESSNVVK ADASMLWWSS YQLPFHYVVT YNSSIDQISP NSCAEEKMED  360
KEAQKERSCS DSNEDSTTGA ETLGGKNIEA VKPFSQELRT RGSVEPCNSR KGFVPYKRCL  420
AERDNGSSVI ISNDRERQKI RVC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G18330.1	2e-47	MYB_related family protein