PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON33557.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family GeBP
Protein Properties Length: 271aa    MW: 30360.9 Da    PI: 8.1727
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON33557.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573103.31.9e-3255148297
      DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfskehdqkifelskkiWg 97 
                  fqr wse+Dei++LqG+i++++++g    +di +fy+ ++ksis++++k+ l +K+ rLKkKf + ++k  +++++p+fsk+hdq++felsk+iWg
  PON33557.1  55 PFQRTWSEDDEITILQGFIEYAKENG---ISDIAGFYNSINKSISADITKKRLGDKLNRLKKKFLDYESKcGADNESPTFSKPHDQNVFELSKMIWG 148
                 59************************...56***********************************99997899999*******************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MHASSDSEYK XYTATKRRKS LASTSAGGVK SKKRTVVEKT KVVGGGGGRT LRLRPFQRTW  60
SEDDEITILQ GFIEYAKENG ISDIAGFYNS INKSISADIT KKRLGDKLNR LKKKFLDYES  120
KCGADNESPT FSKPHDQNVF ELSKMIWGNT NTNTNTNTST PTTTTTTPAA ATAPAIIVDE  180
VVIPENLSGG RVLDLEVNVT DDYDPIIRLP RLLEYFLSDH ELDLDLFEGS MESLEKSWKK  240
VKSCERQYLV QKSRLNDFVN QLKLEATNPT E
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G11510.14e-24GeBP family protein