PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON32638.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

C2H2

Protein Properties

Length: 607aa MW: 69965.6 Da PI: 5.0874

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON32638.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.8	0.00076	306	326	2	22
EETTTTEEESSHHHHHHHHHH CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt 22 C Cgk F++ + k+H ++ PON32638.1 306 YCAVCGKKFKSEKQWKNHEQS 326 5*****************876 PP
2	zf-C2H2	12	0.00062	578	597	2	21
EETTTTEEESSHHHHHHHHH CS zf-C2H2 2 kCpdCgksFsrksnLkrHir 21 +C++Cg+ F ++ L++H++ PON32638.1 578 TCEKCGEDFESRNKLHKHLS 597 6*****************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 607 aa Download sequence
MAASRRRCHY EVLGLRQDST ADEIRSAYKK LALQLHPDKL VQSGLSQADA TAKFQELVQA 60 YEVLSDPRER AWYDSHRSQI LFVDPNSADT VPDSVIPNLF SYFSNTVYSG YADKGTGFYK 120 VYSDVFNKIY ANEISFATKL GLGSNSVREA PTMGNLDCPY AQVTAFYGYW LGFSTVMDFC 180 WVDQYDAMAG PNRKSRRVME EENKKLRKKA KREYNETVRG LAEFVKKRDK RVIDMMVKRN 240 LEMEKKREEE RERKKRLEME RLEKAMAYEE PEWSRIVEEE DEVEGDEDGF EEVDEKRKRD 300 EGKELYCAVC GKKFKSEKQW KNHEQSKKHR EKVAEFRDSI EDEDSLDVED EERNEVDDGV 360 DELGEQMRDG FRIGEEVVEE NDRDCEFYDV DNANKVEEKS GTDVEDNDDD SNEKKEDEDD 420 EMGVLEAMLT GRKNRKNRFP RRGPNETSST NVHIENDSGE FDFRDYNNTK NTRRKRGARK 480 EKSKKKGEEI ERDGTNHNQN DSSNGNDNSQ AEESSSHSFA ENGINVKGDD SSSDDNKKGS 540 NQRLDRKGID TNTKSKNSSK AKGKKANAKA TSKNSSNTCE KCGEDFESRN KLHKHLSDTG 600 HAALKFR

Sequence ? help Back to Top

Protein Sequence Length: 607 aa Download sequence

MAASRRRCHY EVLGLRQDST ADEIRSAYKK LALQLHPDKL VQSGLSQADA TAKFQELVQA  60
YEVLSDPRER AWYDSHRSQI LFVDPNSADT VPDSVIPNLF SYFSNTVYSG YADKGTGFYK  120
VYSDVFNKIY ANEISFATKL GLGSNSVREA PTMGNLDCPY AQVTAFYGYW LGFSTVMDFC  180
WVDQYDAMAG PNRKSRRVME EENKKLRKKA KREYNETVRG LAEFVKKRDK RVIDMMVKRN  240
LEMEKKREEE RERKKRLEME RLEKAMAYEE PEWSRIVEEE DEVEGDEDGF EEVDEKRKRD  300
EGKELYCAVC GKKFKSEKQW KNHEQSKKHR EKVAEFRDSI EDEDSLDVED EERNEVDDGV  360
DELGEQMRDG FRIGEEVVEE NDRDCEFYDV DNANKVEEKS GTDVEDNDDD SNEKKEDEDD  420
EMGVLEAMLT GRKNRKNRFP RRGPNETSST NVHIENDSGE FDFRDYNNTK NTRRKRGARK  480
EKSKKKGEEI ERDGTNHNQN DSSNGNDNSQ AEESSSHSFA ENGINVKGDD SSSDDNKKGS  540
NQRLDRKGID TNTKSKNSSK AKGKKANAKA TSKNSSNTCE KCGEDFESRN KLHKHLSDTG  600
HAALKFR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	193	230	RKSRRVMEEENKKLRKKAKREYNETVRGLAEFVKKRDK
2	204	212	KKLRKKAKR
3	432	438	RKNRKNR
4	560	566	KAKGKKA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G74250.1	1e-147	C2H2 family protein