PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON32488.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

C2H2

Protein Properties

Length: 293aa MW: 32481.2 Da PI: 8.3325

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON32488.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.5	0.00043	226	248	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +Cp Cg Fs+ +L+ H + H PON32488.1 226 VCPQCGVKFSSVTTLVDHVEKvH 248 6*****************99888 PP
2	zf-C2H2	17.7	1e-05	265	287	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +Cp+C+k F+++ +L+ H + H PON32488.1 265 VCPKCSKGFRDPVSLVEHVEReH 287 7*****************99888 PP

Sequence ? help Back to Top
Protein Sequence Length: 293 aa Download sequence
MGTPEFPDLG KHCSVEDCKQ IDFLPFTCDR CRLVFCLEHR SYIKHHCPKA DKKDVTVVIC 60 PLCAKGVRLN PDEDPNITWE THVNTDCDPS NYERVTKKKK CPVPSCKEIL TFSNTLKCRD 120 CLVDHCLKHR FGPDHKCPGP KKPEPSFPFM GLLNRSRKEE QKPNRVPATS SPKWATSFLN 180 AASSVRASAE ASMTKLSNEI SQKWQIAKDG VAQSSSSGSS NGQMEVCPQC GVKFSSVTTL 240 VDHVEKVHEW GGGNRAGVKK VTIDVCPKCS KGFRDPVSLV EHVEREHGGT SLA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G41835.1	1e-130	C2H2 family protein