PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON32470.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

AP2

Protein Properties

Length: 451aa MW: 49299.4 Da PI: 6.9173

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON32470.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	41.4	3.5e-13	140	186	1	53
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkl 53 s+y+GV++++++grW+++I+d + k+++lg f+t Aa+ +++ l PON32470.1 140 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDT-ALAAASKEEFVHIL 186 78*****************......55********.88887777776655 PP
2	AP2	41.2	4.1e-13	198	247	1	54
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkle 54 s+y+GV+ +k grW+A+ + + k+++lg f+++ eAa+a+++a+ k PON32470.1 198 SKYRGVTLHK-CGRWEARMGQF----MGkKYIYLGLFDSEVEAARAYDKAAIKCS 247 89******.7**5554....224******99********9865 PP

Sequence ? help Back to Top
Protein Sequence Length: 451 aa Download sequence
MLDLNLNVVV SFDSAASDSA DKPLESSGSF NSSSNLTADD DEAAADATYS FGILNHQNDD 60 DDVDHHRGSF ARTIQFFPVT ASMAQSSSSS GSRRQWLGLS CLEGNTSTTT AYGGPAEQRI 120 APLNQNPVKK SRRGPRSRSS QYRGVTFYRR TGRWESHIWD CGKQVYLGGF DTALAAASKE 180 EFVHILRRHS TGFSRGSSKY RGVTLHKCGR WEARMGQFMG KKYIYLGLFD SEVEAARAYD 240 KAAIKCSGRE AVTNFEPSSY DGEMMSEADY EVLSSAGTGG NQSLDLNLGI APLSVSNGRK 300 ENVEANDFYF EQGFSDIPLH MRERIENFAS VGPKLPHGTR MAPEHCSIRS DMNSNFFPNN 360 MERAIERGMD VNSLPNWACQ IQGLNGRAAV PPVPLFSTAA SSGFPSSTTT SSSSSPAAGS 420 QLHFPNASIL HHHFPPSITN TNTLPHFYCR S

Sequence ? help Back to Top

Protein Sequence Length: 451 aa Download sequence

MLDLNLNVVV SFDSAASDSA DKPLESSGSF NSSSNLTADD DEAAADATYS FGILNHQNDD  60
DDVDHHRGSF ARTIQFFPVT ASMAQSSSSS GSRRQWLGLS CLEGNTSTTT AYGGPAEQRI  120
APLNQNPVKK SRRGPRSRSS QYRGVTFYRR TGRWESHIWD CGKQVYLGGF DTALAAASKE  180
EFVHILRRHS TGFSRGSSKY RGVTLHKCGR WEARMGQFMG KKYIYLGLFD SEVEAARAYD  240
KAAIKCSGRE AVTNFEPSSY DGEMMSEADY EVLSSAGTGG NQSLDLNLGI APLSVSNGRK  300
ENVEANDFYF EQGFSDIPLH MRERIENFAS VGPKLPHGTR MAPEHCSIRS DMNSNFFPNN  360
MERAIERGMD VNSLPNWACQ IQGLNGRAAV PPVPLFSTAA SSGFPSSTTT SSSSSPAAGS  420
QLHFPNASIL HHHFPPSITN TNTLPHFYCR S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28550.3	8e-74	AP2 family protein