PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON32044.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB_related

Protein Properties

Length: 905aa MW: 100500 Da PI: 4.6238

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON32044.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	30.5	8.3e-10	845	896	1	46
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT....TTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg....kgRtlkqcksrwqk 46 + +WT eE+++l+++v+++ + Wk+I + kgRt ++k++w++ PON32044.1 845 KVPWTLEEEQKLKEGVQKFSDEtnIWKKILEFGSdvfmKGRTTVNLKDKWRT 896 579***************99****98889*************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 905 aa Download sequence
MDNMLVSEST LAWLWVIEAI ASFEEVDPSL LRNAIEAAPE LPDDLGKNTK EFVALRCLEG 60 LFASQHELAS GVPPAQGLKV GFDLSASCED VLQRILQETS VSNLRVSGSE LSRWDIRPFI 120 RHKRACMPKC TLEQLKDAIL DGTHPYADFL REKGGLTFPG RDNRSVVNDS NHDSVTARPA 180 LTGAGVQSMR VEVNLDHLIL ENRNKQLGES LRDGDILPSK RGRSGSASKD MAGNVYENCN 240 GKNSSDDQHM NAKRVKQHAP SDNLSIGQNS VHFHGREPLE DLSERDVPVT NGGHDLPEIE 300 MGIMEEGRVL ENGCNECTVT KRSRQSNNDG FHKNVLDIPC NSPVIPPVIS GEEAHQCLSA 360 DETNGIGNHC AQSSGAFQSV DQNRVSLYGK EQTEESSERD FQATVEEGSV LVDDCNDGNV 420 SNRSQQSNDE ELRKNQSEIL YNVPVLLQDT TRDDPHQHLS VDETKNVSEP CAEPSSAPPE 480 TVDKISTKES KRSYEHDFQF HEPNPASYDT SRQDITAGEA KVDSNGCGEE MSSDNDGFHN 540 ERIDVAKKKH AFLSSQCTVS HDSLIVDWTE QNLCMKCNET GSLLVCSTNN CQLVVHEKCG 600 GSLARFDNKG NFYCPFCACS LAIMEYLEAK KRSSLANKEL AAFICMSSEH QPEESVERLN 660 MEKPLSSGGT ANEDILGQNH EEHLGGTEKN EGNQLELKVN KDNDHQCQNV ILNGQEVEIS 720 ALHNNNINLE CTEKREKEGE ERIVEECPSA RIFEGQENEV PGESDNVAAE NTDVVIVNQG 780 KADVGIQQQV LKDQDIDAGK RPVYDNSEET SETDDYESIS NFHIGIRKRE NGCTYPATPQ 840 TRRKKVPWTL EEEQKLKEGV QKFSDETNIW KKILEFGSDV FMKGRTTVNL KDKWRTMCKV 900 SSKGN

Sequence ? help Back to Top

Protein Sequence Length: 905 aa Download sequence

MDNMLVSEST LAWLWVIEAI ASFEEVDPSL LRNAIEAAPE LPDDLGKNTK EFVALRCLEG  60
LFASQHELAS GVPPAQGLKV GFDLSASCED VLQRILQETS VSNLRVSGSE LSRWDIRPFI  120
RHKRACMPKC TLEQLKDAIL DGTHPYADFL REKGGLTFPG RDNRSVVNDS NHDSVTARPA  180
LTGAGVQSMR VEVNLDHLIL ENRNKQLGES LRDGDILPSK RGRSGSASKD MAGNVYENCN  240
GKNSSDDQHM NAKRVKQHAP SDNLSIGQNS VHFHGREPLE DLSERDVPVT NGGHDLPEIE  300
MGIMEEGRVL ENGCNECTVT KRSRQSNNDG FHKNVLDIPC NSPVIPPVIS GEEAHQCLSA  360
DETNGIGNHC AQSSGAFQSV DQNRVSLYGK EQTEESSERD FQATVEEGSV LVDDCNDGNV  420
SNRSQQSNDE ELRKNQSEIL YNVPVLLQDT TRDDPHQHLS VDETKNVSEP CAEPSSAPPE  480
TVDKISTKES KRSYEHDFQF HEPNPASYDT SRQDITAGEA KVDSNGCGEE MSSDNDGFHN  540
ERIDVAKKKH AFLSSQCTVS HDSLIVDWTE QNLCMKCNET GSLLVCSTNN CQLVVHEKCG  600
GSLARFDNKG NFYCPFCACS LAIMEYLEAK KRSSLANKEL AAFICMSSEH QPEESVERLN  660
MEKPLSSGGT ANEDILGQNH EEHLGGTEKN EGNQLELKVN KDNDHQCQNV ILNGQEVEIS  720
ALHNNNINLE CTEKREKEGE ERIVEECPSA RIFEGQENEV PGESDNVAAE NTDVVIVNQG  780
KADVGIQQQV LKDQDIDAGK RPVYDNSEET SETDDYESIS NFHIGIRKRE NGCTYPATPQ  840
TRRKKVPWTL EEEQKLKEGV QKFSDETNIW KKILEFGSDV FMKGRTTVNL KDKWRTMCKV  900
SSKGN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	827	845	RKRENGCTYPATPQTRRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58340.2	6e-06	MYB_related family protein