PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON31969.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | MYB_related | ||||||||
Protein Properties | Length: 252aa MW: 28563.7 Da PI: 5.5765 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.4 | 1.4e-17 | 22 | 67 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg ++++E+e ++ ++++lG++ W+ Ia++++ gRt++++k++w++yl PON31969.1 22 RGTFSKQEEETILTLHHMLGNK-WSQIAQHLP-GRTDNEIKNYWHSYL 67 899*******************.*********.************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 252 aa Download sequence |
LQRNGKSCRL RWINYLRPGL KRGTFSKQEE ETILTLHHML GNKWSQIAQH LPGRTDNEIK 60 NYWHSYLKKK VAKAEEEMVT DQTKTQCTTS SSESSPSSEK NSNRIPSYES LDQMEKSLST 120 TDQSVNPNPY NLSRDQQPKS SLPRILFAEW LSVDQVNGPD SVNMVQPVVP RETFGHTLNF 180 QDSMGHGILL NEGLFGGDFQ NGLSQVSDCD VLNSEFKFED QISGSGFVDF ISGSDVSIHD 240 FNMHSDVMYT FN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52260.1 | 4e-36 | MYB family protein |