PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON31402.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | MYB_related | ||||||||
Protein Properties | Length: 81aa MW: 9268.17 Da PI: 5.134 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 33.4 | 1e-10 | 31 | 71 | 3 | 45 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 ++++E+ l ++ ++ G + W++Ia +++ gRt++q+ +w PON31402.1 31 QFSEDEETLAIKMYNLVGER-WSLIAGRIP-GRTAEQVEKYWK 71 69******************.*********.***********7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 81 aa Download sequence |
MAHSRHSSSG DNFAHSPEIN SEEPRNEVEV QFSEDEETLA IKMYNLVGER WSLIAGRIPG 60 RTAEQVEKYW KSRNSTCKSD L |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01380.1 | 3e-17 | MYB_related family protein |