PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA12G18630.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

NAC

Protein Properties

Length: 373aa MW: 41230.9 Da PI: 7.8632

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA12G18630.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	149.4	1.8e-46	37	189	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..................kvkaeekew.yfFskrdkkyatgkrknr 76 pGfrFhPtd+elv +yL++kve+k++++ ++ike+diyk++PwdLpk +++a eke+ yfF+ r +ky+++ r+nr ONIVA12G18630.1 37 FPGFRFHPTDQELVGFYLTRKVEKKPFSI-DIIKEIDIYKHDPWDLPKvshgavalqgsssssslsTAAAAEKECgYFFCLRGRKYRNSIRPNR 129 69*************************.99***********77899999999888764445677888*************** PP NAM 77 atksgyWkatgkdkevlsk........kgelvglkktLvfykgrapkgektdWvmheyrl 128 +t sg+Wkatg dk+++s+ g +glkk+Lv+y+g+a kg+ktdW+mhe+rl ONIVA12G18630.1 130 VTGSGFWKATGIDKPIYSSslaaaaagAGDCIGLKKSLVYYRGSAGKGTKTDWMMHEFRL 189 **************8777666655555*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 373 aa Download sequence
MEEEKRLERI IKEIDSSPIS PGGSGAALLA EDDDLVFPGF RFHPTDQELV GFYLTRKVEK 60 KPFSIDIIKE IDIYKHDPWD LPKVSHGAVA LQGSSSSSSL STAAAAEKEC GYFFCLRGRK 120 YRNSIRPNRV TGSGFWKATG IDKPIYSSSL AAAAAGAGDC IGLKKSLVYY RGSAGKGTKT 180 DWMMHEFRLP SSISDSDHLQ DASETWTICR IFKRSMTYTK GRAAAAASMN KRISHQLQHI 240 HHHQQQFYYH EVVHDHGHHH RRHLQHYAGS ASMAAAAANI VDVIDHSSDA ETTTRSHSHS 300 QSHLVADIRH RQSPFMLDFH AGTAVSSSST AAAVWSEVMS FSRDGGSSSG SSWDELGRIM 360 DISTNSANNN YYL

Sequence ? help Back to Top

Protein Sequence Length: 373 aa Download sequence

MEEEKRLERI IKEIDSSPIS PGGSGAALLA EDDDLVFPGF RFHPTDQELV GFYLTRKVEK  60
KPFSIDIIKE IDIYKHDPWD LPKVSHGAVA LQGSSSSSSL STAAAAEKEC GYFFCLRGRK  120
YRNSIRPNRV TGSGFWKATG IDKPIYSSSL AAAAAGAGDC IGLKKSLVYY RGSAGKGTKT  180
DWMMHEFRLP SSISDSDHLQ DASETWTICR IFKRSMTYTK GRAAAAASMN KRISHQLQHI  240
HHHQQQFYYH EVVHDHGHHH RRHLQHYAGS ASMAAAAANI VDVIDHSSDA ETTTRSHSHS  300
QSHLVADIRH RQSPFMLDFH AGTAVSSSST AAAVWSEVMS FSRDGGSSSG SSWDELGRIM  360
DISTNSANNN YYL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43000.1	4e-74	NAC family protein

Link Out ? help Back to Top
Ensembl	ONIVA12G18630.1