PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA12G16890.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 256aa    MW: 27735 Da    PI: 6.6686
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA12G16890.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP245.32.1e-1477128256
              AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      +++G++ ++  grW AeIrd s +g   r+++g++ tae Aa+a++a +++++g+
  ONIVA12G16890.1  77 RFHGIHMRS-YGRWSAEIRDSSYRG--HRVWIGTYATAEAAARAYDAEARRIHGA 128
                      589999998.8*********65555..*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MCGGCLIPDE LVGKPARRTR AAAAGGDSGD GWKHGRRLCP AAAPCNCKPR RRAGAADDDD  60
VGRRRRTTRT RAASEVRFHG IHMRSYGRWS AEIRDSSYRG HRVWIGTYAT AEAAARAYDA  120
EARRIHGAKA NTNFPPPPND VDSGAPPPPP WDLEAHMRFL GEVELDDGGA EPPPPPSHGI  180
PELLHMEPEL ASATQSVHGD DEPWGLDKYM RFLSEVELDD GGAPLPPPPS QHGGVAAAGS  240
PQYGCRYDYL LLMMCN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15066RRRAGAADDDDVGRRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72360.13e-09ERF family protein