PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA12G16880.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 268aa    MW: 29303.5 Da    PI: 8.7155
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA12G16880.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP247.54.3e-1590140255
              AP2   2 gykGVrwdkkrgrWvAeIrdpseng..krkrfslgkfgtaeeAakaaiaarkkleg 55 
                      +++G++++k +grW AeIrd    +  k  r ++g+f+taeeAa a++a +++l+g
  ONIVA12G16880.1  90 RFHGIHRRK-SGRWSAEIRD----NmiKGSRSWVGTFDTAEEAAWAYDAVARRLYG 140
                      689***999.7*********....77455************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
MCGENDDNGG AAGSSRRLPA VGAMRGPCGC EEKLKTTVVV VLSDDDDYEE EFRRTLVLAR  60
SAVYLLLRAL IHIYTRKRRP AASKKQHRHR FHGIHRRKSG RWSAEIRDNM IKGSRSWVGT  120
FDTAEEAAWA YDAVARRLYG AKARTNFHHL PPPRPVVPLP APAVAKRKMN SKRKKPAEVA  180
VAAEMVAPAG GEPAAGEMAP VLLGNALEAT NGWEFEPYSC MGLVVGGAVQ LLHNYAADEP  240
EPADELQLLH LHGGAMVDFA ADGCLWSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72360.12e-12ERF family protein