PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA12G14120.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

WRKY

Protein Properties

Length: 337aa MW: 36021 Da PI: 6.7524

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA12G14120.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	106.1	1.8e-33	188	245	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk+s +prsYYrCt ++C vkk+vers++dp++v++tYeg+H+h+ ONIVA12G14120.1 188 EDGYRWRKYGQKAVKNSSYPRSYYRCTAPRCGVKKRVERSEQDPSMVITTYEGQHTHP 245 8********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 337 aa Download sequence
MSGPGGGGHG LYEDHPAAAG FLPFDHDDDV VASFFFGRSA ASGGGAGAGA GAGDDDGVGL 60 ITPYSSITDY LQGFLQDPVY ASSPLGGDAA VKHETVVDHP SQAGGVAAAP ATPNSSVLSS 120 SSEAAGGDDL RRCKKGRRPE DDEEEDIDDE GSAVQSCKTN KMKNKKGAKK EREPRVAFMT 180 KSEVDHLEDG YRWRKYGQKA VKNSSYPRSY YRCTAPRCGV KKRVERSEQD PSMVITTYEG 240 QHTHPSPVSY HMHRQQGLMH VSARGVMPGA AGAYQFGAPP PPLLGFDEAL AARVRMTMNQ 300 QQQQQQLGFV PSIHAAAARP TMPPLHLHTA QQDLFLP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	131	169	RRCKKGRRPEDDEEEDIDDEGSAVQSCKTNKMKNKKGAK
2	134	172	RRCKKGRRPEDDEEEDIDDEGSAVQSCKTNKMKNKKGAK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18170.1	8e-43	WRKY family protein

Link Out ? help Back to Top
Ensembl	ONIVA12G14120.1