PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA12G11920.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family NAC
Protein Properties Length: 260aa    MW: 28012.5 Da    PI: 9.9389
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA12G11920.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM144.65.4e-4591441128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdL.pkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                      lppGfrF+Ptdeelvv+yL++++ g++l+ +  i++v+++ ++P+dL p     +e+e yfF++++ ky +g+r+nrat +gyWkatgk+k+v 
  ONIVA12G11920.1   9 LPPGFRFRPTDEELVVHYLRRRALGSPLPPAVDIPDVRLLAHDPSDLlP--PGWSEQERYFFTCKEAKYVKGRRANRATGAGYWKATGKEKPVA 100
                      79*************************998556**************43..3447899************************************ PP

              NAM  94 sk.........kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      ++            +vg+k++Lvfy+g+ p+g+ktdWvmheyrl
  ONIVA12G11920.1 101 VSvaaaprsqaAAVVVGMKRSLVFYRGKPPTGKKTDWVMHEYRL 144
                      987777765444445***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
METTAAKKLP PGFRFRPTDE ELVVHYLRRR ALGSPLPPAV DIPDVRLLAH DPSDLLPPGW  60
SEQERYFFTC KEAKYVKGRR ANRATGAGYW KATGKEKPVA VSVAAAPRSQ AAAVVVGMKR  120
SLVFYRGKPP TGKKTDWVMH EYRLAGAGLA PCRRAATADH PARPAEGWVL CRVFRKKGSA  180
AASTASPTAD ADDDDATTER ADDAAAGVRF IDFFARADAR RRRAASPVSS SCVTDASAEH  240
CREQETTSRN GGAAAGDASD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.13e-50NAC family protein