PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA12G04320.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | NAC | ||||||||
Protein Properties | Length: 554aa MW: 58627.2 Da PI: 4.642 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 73.6 | 5e-23 | 27 | 161 | 1 | 127 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleev..ikevdiykvePwdLpk.....kvkaeekewyfFskrdkkya....tgkrknr.atksgy 82 lppG+ F+Pt ee +++yL++ ++gk++++ e+ ++ +d+y P L++ + +w+f ++r+++++ +kr++r +++ g+ ONIVA12G04320.1 27 LPPGVYFNPTREEAMHNYLNRWIAGKTIPEMEAgfVAGADVYGDGPDALRRrhrpgYWCNYVYKWFFLCHRKRQSSrrttGNKRAERvVAAGGR 120 79*************************777664459999**********85345542222455999*99999988744423458888667799* PP NAM 83 WkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127 Wk k+vl +g g +++L fy ++++++kt+W+m+ey+ ONIVA12G04320.1 121 WKVEQG-KKVLG-GGGGGGERDSLGFY--SSNSTKKTSWIMEEYT 161 **6544.68888.88899*********..556667*********7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 554 aa Download sequence |
MDVDPPPPLP PPPPPPATPQ QNTAVELPPG VYFNPTREEA MHNYLNRWIA GKTIPEMEAG 60 FVAGADVYGD GPDALRRRHR PGYWCNYVYK WFFLCHRKRQ SSRRTTGNKR AERVVAAGGR 120 WKVEQGKKVL GGGGGGGERD SLGFYSSNST KKTSWIMEEY TSSAADGAAA AEDRMEPVLC 180 KIYLSPRAPA SEKRALFGED GVAVGPDGRK RNARVTVLAT LFDDVAALLG QPVAAAPPLP 240 APGDPLGHGH FDDVAARFGQ VAVAALPASG DLGHGYFDDD AAALLGQVAM APAPAPGHHQ 300 QGYVVAEALP ESGYVGHYHH DGHLAQAAAA PEQDHYLGYH SHDAHVAEAT PEQGYHDDAH 360 VAVAPAPEQG DLRHDQGHLA AALTPEECGE IVGAYEFHPE MVQMLSMGFA VPDEQLVPQL 420 LDPTGGGYDM ASSATAAAAA APTPRIRPNA AEAMAATATA ETMPPPLDAV AAELSAPPRG 480 LPPELAFRAL PSVQQEPSCD DDDNFGEVVA EAMPPLIGEN AGVDAGSDEP LPDLAGIMTE 540 LDFGHDFFSN QHRE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G55210.1 | 5e-13 | NAC family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA12G04320.1 |