PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA12G03810.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 304aa    MW: 31137.3 Da    PI: 5.7682
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA12G03810.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.77.8e-20154203255
              AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                      +y+GVr+++ +g+W+AeIrdp     +  +r++lg+f+tae+Aa+a++ a+++++g
  ONIVA12G03810.1 154 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFDTAEDAARAYDGAALRFRG 203
                      8********.**********7.....337************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    
MCCTGDEVAG PGEQRRRPLD ADAGGDEGAV ATTSSSLLAA PMLSRRRQAE EMAAMVSALA  60
SVVAGGGGTS LPAKRPAERE PEEGAAVEGV WWSYCSELAA AAAAPSPAAP FPAGYVPSPG  120
QHSPASAAAG DEEELPSPSS ADSSGGGGGT ARKRYRGVRQ RPWGKWAAEI RDPHKAARVW  180
LGTFDTAEDA ARAYDGAALR FRGSRAKLNF PEHATLPPPP TTTTAAAHRC PPPPRTDALL  240
ESQELSPGAG GGDPYSQYAR FLQGSGGDGG EAAARPRGGA SQRTPPATTL LYSFGGEDAS  300
ARYP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1151157ARKRYRG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50080.15e-24ERF family protein