PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA12G01150.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family NAC
Protein Properties Length: 367aa    MW: 40695.4 Da    PI: 7.5922
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA12G01150.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM99.93.6e-315012653128
              NAM  53 aeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       +e+ewyfFs+rd+ky++g r+nra+ sgyWkatg+dk++ls+ ++ ++g+kk Lvfykg+ pkg+ktdW+mheyrl
  ONIVA12G01150.1  50 FGENEWYFFSPRDRKYPNGARPNRAAGSGYWKATGTDKSILSTpTSDNIGVKKALVFYKGKPPKGVKTDWIMHEYRL 126
                      4789*************************************9988899***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 367 aa     Download sequence    
MPAWMQPAVT FVTEAVIALV AKTMFLLGQD DVSHGNIRAP STRIRRKALF GENEWYFFSP  60
RDRKYPNGAR PNRAAGSGYW KATGTDKSIL STPTSDNIGV KKALVFYKGK PPKGVKTDWI  120
MHEYRLTGTS ANNTTTTTKQ RRASSMTMRL DDWVLCRIHK KSNDFNSSDQ HDQEPEGSTV  180
DEQLEDIHDN NSSSQQPPAP PDMNNQQSDF QPMTAMSMSK SCSLTDLLNN LDCAALSQFL  240
LDGSSDAIAE LPAPPSPLIY PNQTLNYNIN NNMPHAFESR LDHHDGYVNN YNVNGLRRKR  300
MMACSATSFD DGSSSSSDFL HVAKKPLLLP SDSRGSGFGG GYCNQQLSET ATGFQFQNGN  360
MLSRPFP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04070.13e-53NAC family protein