PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA11G23210.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

GRAS

Protein Properties

Length: 949aa MW: 106276 Da PI: 6.3077

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA11G23210.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GRAS	126.8	2.5e-39	251	397	2	153
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 + lL++cA+a+++++++ a +lL++++++a +gd+mqR+a+yf+++L+arla+s+++ly+ + +++ +e l+++kl+ ++ + k++ ONIVA11G23210.1 251 RMLLIQCAQAMATDNQQSAGELLKKIKQHALATGDAMQRVAHYFAKGLEARLAGSGKHLYQ--NHV---RMSLVEYLKVYKLYMAACCFKKVAL 339 679*******************************************************5..233...34489**************** PP GRAS 96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg 153 + a +I++av+g++r+Hi+D++i Gl+Wp L++ L sR++gpp++RiT v+ p++g ONIVA11G23210.1 340 MFAAMTIMQAVQGKKRLHIVDYGIRCGLHWPDLFRRLGSREDGPPEVRITIVDIPQPG 397 **************************************************999887 PP
2	GRAS	237.3	6.7e-73	638	949	2	315
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 + lL++cA+a ++++++ a +lL++++++a +gd+mqR+a+yf+++L+arla+ +++ly+ ++ +++ +e l+++kl+ ++ + k++ ONIVA11G23210.1 638 RLLLIQCAQATATDNQQSAGELLKKIKQHALATGDAMQRVAHYFAKGLEARLAGRGKHLYQ-----NQMRMSLVEYLKVYKLYMAACCFKKVAL 726 568*************************************************9999994.....33446699**************** PP GRAS 96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrle 187 + a +I++av+g++r+Hi+D++i Gl+Wp Ll+ L sR++gpp++RiT v+ ++ +++ee g+ L++ A+e++vpf+f++++a ++e ONIVA11G23210.1 727 MFAAMTIMQAVQGKKRLHIVDYGIRCGLHWPDLLRRLGSREDGPPEVRITIVDILQPAfrPFQRIEEAGHCLSSCANEFRVPFRFQAVAAAKWE 820 *************************************************99998999**********************9999* PP GRAS 188 dleleeLrvkpgEalaVnlvlqlhrlldesvsles..erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpres 279 ++ e+L+++p+E+l+Vn + l+desv + +rd L+ + +++P+v++ + ++ ++sFl rf l yysalf l+a+ pr+s ONIVA11G23210.1 821 TVGAEDLHIEPDEVLVVNDLWSFSALMDESVFCDGpnPRDVALRNISKMQPDVFIQGIINGSY-GASFLSRFRAVLLYYSALFGILDATTPRDS 913 ****************************98776669********************9.789*********************** PP GRAS 280 eerikvErellgreivnvvacegaerrerhetlekW 315 r +E+ llg+ + n++acega+ +er e++++W ONIVA11G23210.1 914 GLRLALEQNLLGPYALNAIACEGADLVERPEKYKQW 949 ********************************** PP

Sequence ? help Back to Top
Protein Sequence Length: 949 aa Download sequence
MAIEEEDLNM ETAFPDEGWK SRILFAHSTW VAHDYMANPE DFFWEALLKE NEAPSPSPVF 60 SELPPTPLAN SDGSTDPSSL LDNQLLSYVS SMLMEDEMGS SAAVTNLQCV NRGSTEEANN 120 MLPGSEVVRA FLKGMEEASK LLPRNNSFRM LETVDQVSSH GHCRGGKKKN HDRDEQQLEE 180 ELGRSSKLAA MTNAGTEEAG ARELLDELML HSHETCIKDM EKLRIDMDNE ADKTIKKKGK 240 KGSSSKVVDL RMLLIQCAQA MATDNQQSAG ELLKKIKQHA LATGDAMQRV AHYFAKGLEA 300 RLAGSGKHLY QNHVRMSLVE YLKVYKLYMA ACCFKKVALM FAAMTIMQAV QGKKRLHIVD 360 YGIRCGLHWP DLFRRLGSRE DGPPEVRITI VDIPQPGQLP LNREKVMMVK NHYHKDFVIE 420 EDQYMANPED FFWEALLKKN EAPSPPPVFF DLPATPLSNS DGTDPSSLDN QLLSYVSRML 480 MEDEMGSSAA ITNLQCVNRG STEEANNMLP GSEVVRAFSK GMGEASKLLP RNNSFRTLET 540 VDQVSSDGHC RGRKNKNHDR DEQQLEEELG RSSKLAALTI AGTQEAGAHE LLDELMLHAH 600 ETCIKDMEKL RIDMDNEAEK KINKKDKKGS SSKVVDLRLL LIQCAQATAT DNQQSAGELL 660 KKIKQHALAT GDAMQRVAHY FAKGLEARLA GRGKHLYQNQ MRMSLVEYLK VYKLYMAACC 720 FKKVALMFAA MTIMQAVQGK KRLHIVDYGI RCGLHWPDLL RRLGSREDGP PEVRITIVDI 780 LQPAFRPFQR IEEAGHCLSS CANEFRVPFR FQAVAAAKWE TVGAEDLHIE PDEVLVVNDL 840 WSFSALMDES VFCDGPNPRD VALRNISKMQ PDVFIQGIIN GSYGASFLSR FRAVLLYYSA 900 LFGILDATTP RDSGLRLALE QNLLGPYALN AIACEGADLV ERPEKYKQW

Sequence ? help Back to Top

Protein Sequence Length: 949 aa Download sequence

MAIEEEDLNM ETAFPDEGWK SRILFAHSTW VAHDYMANPE DFFWEALLKE NEAPSPSPVF  60
SELPPTPLAN SDGSTDPSSL LDNQLLSYVS SMLMEDEMGS SAAVTNLQCV NRGSTEEANN  120
MLPGSEVVRA FLKGMEEASK LLPRNNSFRM LETVDQVSSH GHCRGGKKKN HDRDEQQLEE  180
ELGRSSKLAA MTNAGTEEAG ARELLDELML HSHETCIKDM EKLRIDMDNE ADKTIKKKGK  240
KGSSSKVVDL RMLLIQCAQA MATDNQQSAG ELLKKIKQHA LATGDAMQRV AHYFAKGLEA  300
RLAGSGKHLY QNHVRMSLVE YLKVYKLYMA ACCFKKVALM FAAMTIMQAV QGKKRLHIVD  360
YGIRCGLHWP DLFRRLGSRE DGPPEVRITI VDIPQPGQLP LNREKVMMVK NHYHKDFVIE  420
EDQYMANPED FFWEALLKKN EAPSPPPVFF DLPATPLSNS DGTDPSSLDN QLLSYVSRML  480
MEDEMGSSAA ITNLQCVNRG STEEANNMLP GSEVVRAFSK GMGEASKLLP RNNSFRTLET  540
VDQVSSDGHC RGRKNKNHDR DEQQLEEELG RSSKLAALTI AGTQEAGAHE LLDELMLHAH  600
ETCIKDMEKL RIDMDNEAEK KINKKDKKGS SSKVVDLRLL LIQCAQATAT DNQQSAGELL  660
KKIKQHALAT GDAMQRVAHY FAKGLEARLA GRGKHLYQNQ MRMSLVEYLK VYKLYMAACC  720
FKKVALMFAA MTIMQAVQGK KRLHIVDYGI RCGLHWPDLL RRLGSREDGP PEVRITIVDI  780
LQPAFRPFQR IEEAGHCLSS CANEFRVPFR FQAVAAAKWE TVGAEDLHIE PDEVLVVNDL  840
WSFSALMDES VFCDGPNPRD VALRNISKMQ PDVFIQGIIN GSYGASFLSR FRAVLLYYSA  900
LFGILDATTP RDSGLRLALE QNLLGPYALN AIACEGADLV ERPEKYKQW

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	237	277	KKGKKGSSSKVVDLRMLLIQCAQAMATDNQQSAGELLKKIK
2	273	278	LKKIKQ
3	624	664	KKGKKGSSSKVVDLRMLLIQCAQAMATDNQQSAGELLKKIK
4	660	665	LKKIKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G29060.1	1e-89	GRAS family protein

Link Out ? help Back to Top
Ensembl	ONIVA11G23210.1