PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA11G21180.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family HD-ZIP
Protein Properties Length: 861aa    MW: 94433.6 Da    PI: 6.1523
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA11G21180.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.42.5e-182785357
                     --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
         Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                     k  ++t+eq+e+Le++++ +++p+ ++r++L +++    +++ +q+kvWFqNrR ++k+
  ONIVA11G21180.1 27 KYVRYTPEQVEALERVYADCPKPTSSRRQQLLRECpilaNIEPKQIKVWFQNRRCRDKQ 85
                     5678****************************************************996 PP
2START1671.3e-521653722204
                      HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEE CS
            START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galql 93 
                      +aee+++e+++ka+ ++  Wv+++ +++g++++ +++ s++++g a+ra+g+v  +++++ve+l d++  W ++++  e+   i  g  g+++l
  ONIVA11G21180.1 165 IAEETLTEFLSKATGTAIDWVQMPGMKPGPDSVGIVAISHGCRGVAARACGLVNLEPTKVVEILKDRP-SWFRDCRNLEVFTMIPAGngGTVEL 257
                      789*******************************************************9999988888.****************9999***** PP

                      EEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHH CS
            START  94 mvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrs 183
                       +++l+a+++lvp Rdf+++Ry+ ++++g++v++++S++     p+    +++vRae+lpSg+l++p+++g+s v++v+h dl++++++++lr+
  ONIVA11G21180.1 258 VYTQLYAPTTLVPaRDFWTLRYTTTMEDGSLVVCERSLSGSGGGPSaasAQQYVRAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRP 351
                      ***************************************9999999898999****************************************** PP

                      HHHHHHHHHHHHHHHHTXXXX CS
            START 184 lvksglaegaktwvatlqrqc 204
                      l++s+++ ++k+++a+l++ +
  ONIVA11G21180.1 352 LYESSRVVAQKMTTAALRHIR 372
                      *****************9865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 861 aa     Download sequence    
MAAAVAMRGS SSDGGGYDKV SGMDSGKYVR YTPEQVEALE RVYADCPKPT SSRRQQLLRE  60
CPILANIEPK QIKVWFQNRR CRDKQRKESS RLQAVNRKLT AMNKLLMEEN ERLQKQVSQL  120
VHENAHMRQQ LQNTPLANDT SCESNVTTPQ NPLRDASNPS GLLSIAEETL TEFLSKATGT  180
AIDWVQMPGM KPGPDSVGIV AISHGCRGVA ARACGLVNLE PTKVVEILKD RPSWFRDCRN  240
LEVFTMIPAG NGGTVELVYT QLYAPTTLVP ARDFWTLRYT TTMEDGSLVV CERSLSGSGG  300
GPSAASAQQY VRAEMLPSGY LVRPCEGGGS IVHIVDHLDL EAWSVPEVLR PLYESSRVVA  360
QKMTTAALRH IRQIAQETSG EVVYALGRQP AVLRTFSQRL SRGFNDAISG FNDDGWSIMG  420
GDGVEDVVIA CNSTKKIRSN SNAGIAFGAP GGIICAKASM LLQSVPPAVL VRFLREHRSE  480
WADYNIDAYL ASTLKTSACS LPGLRPMRFS GSQIIIPLAH TVENEEILEV VRLEGQPLTH  540
DEALLSRDIH LLQLCTGIDE KSVGSSFQLV FAPIDDFPDE TPLISSGFRV IPLDMKTVKR  600
CQIPNYIIHY PFDCSLGPYD GASSGRTLDL ASSLEVGSAT AQASGDASAD DCNLRSVLTI  660
AFQFPYELHL QDSVAAMARQ YVRSIVSAVQ RVSMAISPSQ TGLNAGQRII SGFPEAATLA  720
RWVCQSYHYH LGVELLSQSD GDAEQLLKML WHYQDAILCC SFKEKPVFTF ANKAGLDMLE  780
TSLVALQDLT LDRIFDEPGK EALFSNIPKL MEQGHVYLPS GVCMSGMGRH VSFDQAVAWK  840
VLAEDSNVHC LAFCFVNWSF V
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1597601TVKRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60690.10.0HD-ZIP family protein