PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA11G16660.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

GRF

Protein Properties

Length: 436aa MW: 48617.4 Da PI: 9.0378

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA11G16660.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	71.8	7.8e-23	186	229	2	45
WRC 2 aepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 ep+rCrRtDGKkWRCsr++++++k+CErH++rgr+rsrk++e ONIVA11G16660.1 186 VEPRRCRRTDGKKWRCSRDAVGDQKYCERHINRGRHRSRKHVEG 229 59***************************************996 PP
2	QLQ	58	2.8e-20	133	169	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 ++FT++Q+++L++Q+l+yK++aan+ vP+ Ll++i++ ONIVA11G16660.1 133 GPFTPTQWMELEHQALIYKHIAANVSVPSSLLLPIRR 169 59*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 436 aa Download sequence
MAMEIQEACK KNTMADVVSS KVEEEEEGKS KSKMGKGIPT ISIFFIISWI HKLFLFWRRR 60 RRADVELLLP QWNSRKPYTT CSWASLASGL FALLDFSSEY FIICAHQFCL CCDEGLGLSS 120 GGSMQGVLAR VRGPFTPTQW MELEHQALIY KHIAANVSVP SSLLLPIRRS LHPWGWGSFP 180 PGCADVEPRR CRRTDGKKWR CSRDAVGDQK YCERHINRGR HRSRKHVEGR KATLTIAEPS 240 MVIAAGVSSR GHTVARQKQV KGSAATISDP FSRQSNRKFL EKQNVVDQLS PMDSFDFSST 300 QSSPNYDNVA LSPLKLHHDH DESYIGHGAG SSSEKGSMMH ESRLTVSKET LDDGPLGEVF 360 KRKNCQSAST EILTEKWTEN PNLHCPSGIL QMATKFNSIS SGNTVNSGGT AVENLITDNG 420 YLTARMMNPH IVPTLL

Sequence ? help Back to Top

Protein Sequence Length: 436 aa Download sequence

MAMEIQEACK KNTMADVVSS KVEEEEEGKS KSKMGKGIPT ISIFFIISWI HKLFLFWRRR  60
RRADVELLLP QWNSRKPYTT CSWASLASGL FALLDFSSEY FIICAHQFCL CCDEGLGLSS  120
GGSMQGVLAR VRGPFTPTQW MELEHQALIY KHIAANVSVP SSLLLPIRRS LHPWGWGSFP  180
PGCADVEPRR CRRTDGKKWR CSRDAVGDQK YCERHINRGR HRSRKHVEGR KATLTIAEPS  240
MVIAAGVSSR GHTVARQKQV KGSAATISDP FSRQSNRKFL EKQNVVDQLS PMDSFDFSST  300
QSSPNYDNVA LSPLKLHHDH DESYIGHGAG SSSEKGSMMH ESRLTVSKET LDDGPLGEVF  360
KRKNCQSAST EILTEKWTEN PNLHCPSGIL QMATKFNSIS SGNTVNSGGT AVENLITDNG  420
YLTARMMNPH IVPTLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37740.1	2e-37	GRF family protein

Link Out ? help Back to Top
Ensembl	ONIVA11G16660.1