PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA11G13990.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | GRAS | ||||||||
Protein Properties | Length: 780aa MW: 81942.3 Da PI: 6.5944 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 428.7 | 4.8e-131 | 412 | 779 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn...sseelaalklfsevsPil 91 lv+lLl+cA+ vs+gd+ +a + L l+ asp gd+mqR+a++f+ ALaarl+ +s ++++ +p++++++ s e+l++++++++++P++ ONIVA11G13990.1 412 LVHLLLACADLVSKGDHPAALRHLHLLRRVASPLGDSMQRVASHFADALAARLSLLSSPTSASPSPRAAAPYPfppSPETLKVYQILYQACPYI 505 68*****************************************************899999999999999888999****************** PP GRAS 92 kfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakr 185 kf+h+taNqaI ea++ge+rvH++D+di qG QWpa+lqaLa+Rp+gpp+lR+Tgvg+ +++etg+ La++A++l+vpfef++ +a+r ONIVA11G13990.1 506 KFAHFTANQAIFEAFHGEDRVHVVDLDILQGYQWPAFLQALAARPGGPPTLRLTGVGH----PPAAVRETGRHLASLAASLRVPFEFHAAAADR 595 **********************************************************....99*************************9999* PP GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpres 279 le l++ +L+ + gEalaVn v +lhr++ +s+ + +L+++++ Pk++++veqea hn++ Fl rfleal+yysa+fdsl+a++p+es ONIVA11G13990.1 596 LERLRPAALHRRVGEALAVNAVNRLHRVP------SSHLPPLLSMIRDQAPKIITLVEQEAAHNGPYFLGRFLEALHYYSAIFDSLDATFPAES 683 ****************************9......445566***************************************************** PP GRAS 280 eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSa 372 +r+kvE+ ll++ei+nvvacegaer++rhe+le+Wr+ +e GF++vpls a+ q + ll ++ +dgyr+ e+sg+l+lgW+dr+++++Sa ONIVA11G13990.1 684 TARMKVEQCLLAPEIRNVVACEGAERVARHERLERWRRLMEGRGFEAVPLSAAAVGQSQVLLGLYGaGDGYRLTEDSGCLLLGWQDRAIIAASA 777 ********************************************************************************************** PP GRAS 373 Wr 374 Wr ONIVA11G13990.1 778 WR 779 *8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 780 aa Download sequence |
MGTTTMLNAA DMAGGRAKLQ QQQAPTSPTA SVSESNIVAS TASADPEAND ALAGLQALRF 60 DGGGDIDDVE IQSPDIALWE SIFADQIGVS GAGADFLLSM SSAAASPRRD FMACSPKRDY 120 MVTTSSPKRD YMVTSSPKRD YMVSSPKREY MVTSPRREMA TSPRRATFSN LYTSSHGGGG 180 GGGHHLHHQS YVHGGGMEGG GGGHGAQPQY GGLVGHGKGK AQSPLHKVYI NNVGGGSGGG 240 GVKSNTPSTL SCSSSYVVHG GESGLPSLPS MDPFLEEGYL GSYQLPEKAA GGVGGGGGGD 300 INGSGASASV VTAPASSQLL PTLSECLAMP EPAYRGGGDE AVAAAMAVAG ELPVGAFVQP 360 ELYYGGGGGE FGGEGMAPPL QHQMAADSSL HSMLGSVIQS EAEQEQDSGL QLVHLLLACA 420 DLVSKGDHPA ALRHLHLLRR VASPLGDSMQ RVASHFADAL AARLSLLSSP TSASPSPRAA 480 APYPFPPSPE TLKVYQILYQ ACPYIKFAHF TANQAIFEAF HGEDRVHVVD LDILQGYQWP 540 AFLQALAARP GGPPTLRLTG VGHPPAAVRE TGRHLASLAA SLRVPFEFHA AAADRLERLR 600 PAALHRRVGE ALAVNAVNRL HRVPSSHLPP LLSMIRDQAP KIITLVEQEA AHNGPYFLGR 660 FLEALHYYSA IFDSLDATFP AESTARMKVE QCLLAPEIRN VVACEGAERV ARHERLERWR 720 RLMEGRGFEA VPLSAAAVGQ SQVLLGLYGA GDGYRLTEDS GCLLLGWQDR AIIAASAWRC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66350.1 | 1e-92 | GRAS family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA11G13990.1 |