PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA11G05790.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family GATA
Protein Properties Length: 430aa    MW: 44443.4 Da    PI: 7.4807
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA11G05790.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA58.21.1e-18362395134
             GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                      Cs+Cgt++Tp+WR gpdg+ tLCnaCG++ +  +
  ONIVA11G05790.1 362 CSHCGTSETPQWRMGPDGPGTLCNACGIRSKMDR 395
                      *****************************99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 430 aa     Download sequence    
MPKPTPSSSS FLDFTGGVDG DDDDPSCPFE GLCCPDDPLD QVLNFDSSDF GHVFFESLDV  60
ELFLPRGGPS RGAGEEDSKG AVERVAFGSS AAVESELGGV GGGGAGSEVS VPGGAGGGRG  120
EDMETEALDV KPVVGVGAGG AMGAHVAGGV GAPGAFPESK QLVPWPCAVG AGASAPGAAP  180
DNRLLALPDV RFDALTAEGA APGGERGKTI PDSVSKNGLP TLPGVRSATP TAPPATPFRL  240
EWDHAAAPSS SATTTPSDSS LSSPPSLSSV FPRIARVFPS RTKPRRRRTL RRQHWSLICP  300
LHLVPVAAAA RGKSISELNA SASASAGTDA GTPSINDGGG GSYHRRVVGR QRNRQVRKDR  360
RCSHCGTSET PQWRMGPDGP GTLCNACGIR SKMDRLLPEY RPSTSPSFNG DEHSNRHRKV  420
LKLREKKGRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36240.14e-26GATA family protein