PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA11G04340.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 318aa    MW: 32414.7 Da    PI: 5.417
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA11G04340.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.42.3e-20130179255
              AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                      +y+GVr+++ +g+W+AeIrdp+    + +r++lg+f+tae Aa+a++ a+++++g
  ONIVA11G04340.1 130 RYRGVRQRP-WGKWAAEIRDPV----KaARVWLGTFDTAEAAARAYDDAALRFRG 179
                      8********.**********64....55************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MCGGGKVASP PGPRLPRLAG AGGEEEEEEA AAGMLSRHGQ AREMSVMVSA LARVVAGGGG  60
GEAEEWWPPA YGAAPLPPST SPASHEHAAA MAAGQYAPAT SSAVASPREQ ASSPSSGDAA  120
AGGGGGGRKR YRGVRQRPWG KWAAEIRDPV KAARVWLGTF DTAEAAARAY DDAALRFRGC  180
RAKLNFPEDA ALLPPPPPPP APAPTPPQSQ GMVGVGEEYS EYARFLQGAG EPPHFLEQIM  240
EDSPRPSTAA GASSSSSGQS SFPLFYSFAG HELGGNEANL ARPPESGGAG GDGGRGSSPP  300
ATWPGYGWGA PPPWDPSR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1127133GRKRYRG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50080.12e-23ERF family protein