PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA11G01230.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family WRKY
Protein Properties Length: 280aa    MW: 31661.6 Da    PI: 6.2248
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA11G01230.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY58.81e-18122186259
                      --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSST....TEEEEEEES--SS- CS
             WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedp....kvveitYegeHnhe 59 
                      +Dg++WrKYGqK +  ++++rsYYrC+ +   gCp++k v++ ++ +    k++++ Y g+H+++
  ONIVA11G01230.1 122 NDGHQWRKYGQKWISRAKHSRSYYRCANSkvqGCPATKTVQQMDSSGngtsKLFNVDYYGQHTCR 186
                      8*************************9887889********99876522226899*******995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MKILESFGHS DCQVVINMIE HQKALMVELR GMVMPLLPSD NEQAKLALQL LGDILSCSDK  60
AISMLELGGD TKKLTNLVGG KRKGDKHSMD NHNLEEEAKE SVSKRRKNAE HTGSTVAQAP  120
HNDGHQWRKY GQKWISRAKH SRSYYRCANS KVQGCPATKT VQQMDSSGNG TSKLFNVDYY  180
GQHTCRGDGI ADPYVVDTAH HSMEPINQNE CNSPTLEHEA HEVQDERFEN LCMVQNMPEY  240
LIDFELERAF EFIVNSPLGS EHWTFDDSIR CEHSPICIWG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46400.19e-19WRKY family protein