PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA11G01050.2
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family WRKY
Protein Properties Length: 263aa    MW: 29665.1 Da    PI: 8.5706
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA11G01050.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY58.71.1e-18105169259
                      --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSST....TEEEEEEES--SS- CS
             WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedp....kvveitYegeHnhe 59 
                      +Dg++WrKYGqK +  ++++rsYYrC+ +   gCp++k v++ ++ +    k++++ Y g+H+++
  ONIVA11G01050.2 105 NDGHQWRKYGQKWISRAKHSRSYYRCANRkvqGCPATKTVQQMDSSGngtsKLFNVDYYGQHTCR 169
                      8**************************988889********99876522226899*******995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MARRRVSAGA ASTPIHQIGI QGRTTKALHG CSVVIKSSTS VVGPYAWVRS RGGRNKLSVQ  60
TIGKRKGDKH SMDNHNLEEE AKESVSKRRK NAEHTGSTVA QAPHNDGHQW RKYGQKWISR  120
AKHSRSYYRC ANRKVQGCPA TKTVQQMDSS GNGTSKLFNV DYYGQHTCRG DGIANPYVVD  180
TAHHSMEPIN QNECNSPTLE HEAHEVQDER FENLCMVQNM PEYLIDFELE RAFEFIVNSP  240
LGSEHWTFDD SIRCEHSPIC IWG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46400.11e-16WRKY family protein