PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA11G01050.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family WRKY
Protein Properties Length: 277aa    MW: 31077.6 Da    PI: 8.4062
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA11G01050.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY58.61.2e-18119183259
                      --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSST....TEEEEEEES--SS- CS
             WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedp....kvveitYegeHnhe 59 
                      +Dg++WrKYGqK +  ++++rsYYrC+ +   gCp++k v++ ++ +    k++++ Y g+H+++
  ONIVA11G01050.1 119 NDGHQWRKYGQKWISRAKHSRSYYRCANRkvqGCPATKTVQQMDSSGngtsKLFNVDYYGQHTCR 183
                      8**************************988889********99876522226899*******995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MARRRVSAGA ASTPIHQIGI QGRTTKALHG CSVVIKSSTS VVGPYAWVRS RGGRNKLSVQ  60
TIELGGDTNK LTNLVGGKRK GDKHSMDNHN LEEEAKESVS KRRKNAEHTG STVAQAPHND  120
GHQWRKYGQK WISRAKHSRS YYRCANRKVQ GCPATKTVQQ MDSSGNGTSK LFNVDYYGQH  180
TCRGDGIANP YVVDTAHHSM EPINQNECNS PTLEHEAHEV QDERFENLCM VQNMPEYLID  240
FELERAFEFI VNSPLGSEHW TFDDSIRCEH SPICIWG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46400.11e-16WRKY family protein