PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA10G22060.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family HD-ZIP
Protein Properties Length: 879aa    MW: 94281.6 Da    PI: 5.6372
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA10G22060.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox64.71.3e-20132187156
                      TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
         Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                      +++ +++t++q++++e+lF+++++p+ ++r +L+++lgL+ rqVk+WFqNrR+++k
  ONIVA10G22060.1 132 KKRYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQELGLKPRQVKFWFQNRRTQMK 187
                      688999***********************************************998 PP
2START129.92.9e-413475782206
                      HHHHHHHHHHHHHHHC-TT-EEEE.......EXCCTTEEEEEEESSS.................SCEEEEEEEECCSCHHHHHHHHHCCCGGCT CS
            START   2 laeeaaqelvkkalaeepgWvkss.......esengdevlqkfeeskv................dsgealrasgvvdmvlallveellddkeqW 72 
                      la +aa++l ++  a+ep+Wv+ +       e           e ++                  + e  r+ +vv+m++ +lv  +ld + +W
  ONIVA10G22060.1 347 LAATAADQLARMCRAGEPLWVRQRgaevmavE-----------EHARMfswpvdgakqgdggavARAEGTRDNAVVIMNSINLVDAFLDAN-KW 428
                      678999******************66554333...........3333344444445567778888888888999*****************.** PP

                      -TT-S....EEEEEEEECTT........EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE..TTS-EEEEEEEEE-TTS--...-TTSEE-EESSE CS
            START  73 detla....kaetlevissg........galqlmvaelqalsplvp.RdfvfvRyirq.lgagdwvivdvSvdseqkppe..sssvvRaellpS 150
                       e ++    ka t++ i+ g        g+l lm+ae q+lsplv+ R++vf Ry+     +g+w+ivd   +  ++     ++svvR++++pS
  ONIVA10G22060.1 429 MELFPsivcKARTIQIINHGaasghlgsGTLLLMQAEVQFLSPLVAaREVVFFRYCVHnADEGSWAIVDFPAEGFEE--GllQASVVRCRRRPS 520
                      **********************************************************9999*******55555555..356************ PP

                      EEEEEEECTCEEEEEEEE-EE--SSXX..HHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
            START 151 giliepksnghskvtwvehvdlkgrlp..hwllrslvksglaegaktwvatlqrqcek 206
                      g++i++++ng+s+v+wveh+++ g     + ++r  v sg+a+ga +w++ lqrqce+
  ONIVA10G22060.1 521 GCIIQDMPNGYSRVVWVEHMEMVGEEKplQPVFRDYVASGAAFGATRWLSILQRQCER 578
                      *********************98765449***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 879 aa     Download sequence    
MFGDCQVLSS MAAMAGASSS ADALFASPLI PNPALAGFMS SSAAMPFHHF SNAAATLIPK  60
EEGLMGGLHV AKDEEMDLEM DMELSGGSGS AHLDGLLSFA DVDDDHKPQH SGHDQPPDAA  120
QPSGAAGGNA KKKRYHRHTA HQIQQMEALF KECPHPDDKQ RLKLSQELGL KPRQVKFWFQ  180
NRRTQMKAQQ DRADNVILRA ENENLKSDNF RLQAAIRNVV CPNCGHAAVL ADMSYEEQQL  240
RIENARLKDE LDRLACIATR YGGGGGRQPV LSTSALSCIS APPPVLMPPL DLDMNVYSRH  300
FAEQAPVMGC GDLIPPPVVP QHDGAAAYMG AMMAPVQEQD KQLVVDLAAT AADQLARMCR  360
AGEPLWVRQR GAEVMAVEEH ARMFSWPVDG AKQGDGGAVA RAEGTRDNAV VIMNSINLVD  420
AFLDANKWME LFPSIVCKAR TIQIINHGAA SGHLGSGTLL LMQAEVQFLS PLVAAREVVF  480
FRYCVHNADE GSWAIVDFPA EGFEEGLLQA SVVRCRRRPS GCIIQDMPNG YSRVVWVEHM  540
EMVGEEKPLQ PVFRDYVASG AAFGATRWLS ILQRQCERLA SELARNIADL GVIRTPEART  600
NMMKLSQRMI TTFCANISAS GTQSWTALSD STQDTIRVTT RKNTEPGQPS GVILTAVSTS  660
WLPFTHQQVF ELLADEQQRC QLEILSNGGS LHEVAHIANG SHPRNCISLL RINAASNSSQ  720
NVELLLQESS THPDGGSLVV FATVDVDAIQ VTMSGEDPSY IPLLPLGFAI FPATSPSPAA  780
APTISSSTTT TTGNGNGETS STPPRNSSSN NNNADELLPP NGCLLTVGMQ VLASAVPSAK  840
LNLSSVTAIN SHVCNAIHQI TAALKGSAGG AGGEPASDQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G46880.10.0HD-ZIP family protein