PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA10G21110.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

MYB_related

Protein Properties

Length: 274aa MW: 30277.2 Da PI: 6.683

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA10G21110.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.5	2e-15	100	144	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+++++++ +qlG+g+W+ I++ + + Rt+ q+ s+ qky ONIVA10G21110.1 100 PWTEEEHKKFLEGLRQLGKGDWRGISKNFVTSRTATQVASHAQKY 144 8*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 274 aa Download sequence
MEQHEEAAER KPSPPVIFRL FGVEVRGGGG GVDEEEYEEE EVEGGLFIKK SSSMPNLTSI 60 DPLPVPADGG KRRASDDSEL ASGQQKRRRR KVQERKKGVP WTEEEHKKFL EGLRQLGKGD 120 WRGISKNFVT SRTATQVASH AQKYFLRQTN PGKKKRRASL FDVVAECSDD QLPSPQSVGT 180 KPPTQDIIHT DRGDVPILSY PVARGFRGDS VQVDELTEYV KRLKAAEDMS LSMISGLEMA 240 SSSISSLELS IAPPHCAIEA AIKDMLVTYA CFAC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	71	91	KRRASDDSELASGQQKRRRRK
2	86	91	KRRRRK
3	86	97	KRRRRKVQERKK
4	87	97	RRRRKVQERKK
5	153	157	KKKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G47390.1	3e-31	MYB_related family protein

Link Out ? help Back to Top
Ensembl	ONIVA10G21110.1