PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA10G21060.7
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family MYB_related
Protein Properties Length: 318aa    MW: 34489.3 Da    PI: 6.957
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA10G21060.7genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.91.1e-1395139347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ +++ + ++lG+g+W+ I+r +   Rt+ q+ s+ qky
  ONIVA10G21060.7  95 PWTEEEHRRFLLGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKY 139
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MTRRCSHCSH NGHNSRTCPN RGVKIFGVRL TDGSIRKSAS MGNLSLLSSA AGSTSGGASP  60
ADGPDAAPTA ADGYASDDFV QGSSSATRDR KKGVPWTEEE HRRFLLGLQK LGKGDWRGIS  120
RNFVVSRTPT QVASHAQKYF IRQSNMTRRK RRSSLFDMVP DESMDLPPLP GGQEPETQVL  180
NQPALPPPRE EEEVDSMESD TSAVAESSSA SAIMPDNLQS TYPVIVPAYF SPFLQFSVPF  240
WQNQKDEDGP VQETHEIVKP VPVHSKSPIN VDELVGMSKL SIGESNQETV STSLSLNLVG  300
GQNRQSAFHA NPPTRAQA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.17e-99MYB_related family protein