PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA10G21060.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family MYB_related
Protein Properties Length: 334aa    MW: 36688.2 Da    PI: 5.429
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA10G21060.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.81.2e-13111155347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ +++ + ++lG+g+W+ I+r +   Rt+ q+ s+ qky
  ONIVA10G21060.1 111 PWTEEEHRRFLLGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKY 155
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MAGTPGRRPP AAGSAPQRNP TGGRVMGVFV RRWRLVLRAF AGGEDGGAAL GERGDASSGI  60
SDLGLWKMDL SDDVYQLLSE VKHMNLMMET VATAHSEYAN MEWLPLPAGV PWTEEEHRRF  120
LLGLQKLGKG DWRGISRNFV VSRTPTQVAS HAQKYFIRQS NMTRRKRRSS LFDMVPDESM  180
DLPPLPGGQE PETQVLNQPA LPPPREEEEV DSMESDTSAV AESSSASAIM PDNLQSTYPV  240
IVPAYFSPFL QFSVPFWQNQ KDEDGPVQET HEIVKPVPVH SKSPINVDEL VGMSKLSIGE  300
SNQETVSTSL SLNLVGGQNR QSAFHANPPT RAQA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.15e-69MYB_related family protein