PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA10G19340.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

G2-like

Protein Properties

Length: 300aa MW: 32746.8 Da PI: 7.93

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA10G19340.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	100.6	1e-31	26	79	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH++Fv+a+++LGG++kAtPk++l+lm+v gLt++hvkSHLQ+YR ONIVA10G19340.1 26 PRLRWTPDLHHCFVHAIHKLGGQHKATPKRVLQLMGVGGLTISHVKSHLQMYRN 79 8****************************************************5 PP
2	Myb_DNA-binding	52	1.6e-16	27	78	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT++++ +v+a+++lGg t+k++ + mg g+t ++ks++q+y+ ONIVA10G19340.1 27 RLRWTPDLHHCFVHAIHKLGGQhkaTPKRVLQLMGvGGLTISHVKSHLQMYR 78 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 300 aa Download sequence
MAMVRGTMVR RERIEGVRQY NRSKVPRLRW TPDLHHCFVH AIHKLGGQHK ATPKRVLQLM 60 GVGGLTISHV KSHLQMYRNM RNDDLGIQQM DDQEQTFAGG MQIWTDMQLQ DHHHEPNEME 120 TRRAEASTQT GFLRSQGICE RDVSSGLPVP AAYYSYYTPM AHGAPPAAAD GAGHDDPPRL 180 LGLVVMATTT RRGSREEHKA TPPPENGAIR HGRKARRTTA AAEEEERDGD GDELSLSLTL 240 DSGLSCRSSG GAGAYCCSEG SSSNWLISSP SSTTSLVAGG CSRRSTPAML SSVVSLDLSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02060.1	1e-29	G2-like family protein

Link Out ? help Back to Top
Ensembl	ONIVA10G19340.1