PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA10G18400.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family NAC
Protein Properties Length: 321aa    MW: 35135.1 Da    PI: 4.9146
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA10G18400.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM159.61.2e-4981251122
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                      +ppGfrFhPtdeelv +yL+kkv+++k++l +vi++vd+y++ePwdL+   ++e++ewyfFs +d+ky+tg+r+nrat +g+Wkatg+dk+v +
  ONIVA10G18400.1   8 VPPGFRFHPTDEELVGYYLRKKVASQKIDL-DVIRDVDLYRIEPWDLQ--GYEEQSEWYFFSYKDRKYPTGTRTNRATMTGFWKATGRDKAVRE 98 
                      69****************************.9***************8..345789*************************************9 PP

              NAM  95 kkgelvglkktLvfykgrapkgektdWv 122
                       +++l+g++ktLvfykgrap+g+ktdW+
  ONIVA10G18400.1  99 -RSRLIGMRKTLVFYKGRAPNGHKTDWI 125
                      .999***********************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
MVIMESCVPP GFRFHPTDEE LVGYYLRKKV ASQKIDLDVI RDVDLYRIEP WDLQGYEEQS  60
EWYFFSYKDR KYPTGTRTNR ATMTGFWKAT GRDKAVRERS RLIGMRKTLV FYKGRAPNGH  120
KTDWIEEGWV VCRAFKKRTM QPPRSSIGAW EASYSYHDPA VFVGGGEHFK QEAAAELDGV  180
AAAAGANAFL RYSTRLAELP QLESPPLPSQ GSQAASAVVD GEEDNADSSR RPGGGGGAAA  240
AVTTDWRAFD KFVASQLSPE EQHTCRATDD DDMAALLLLD GGGQEDDAGR WLGSAGLLSA  300
VAADATTDCG LGTSCVPGDI N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18060.16e-85NAC family protein