PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA10G18190.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 193aa    MW: 20520.1 Da    PI: 6.8039
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA10G18190.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.47.3e-183483155
              AP2  1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                     + y+GVr++   g+Wv+eIr+       +  r++lg++ t+e+Aa+a++aa+++l+g
  ONIVA10G18190.1 34 PVYRGVRFR--AGKWVSEIRElR-----KpSRIWLGTYATPEMAAAAYDAAALALRG 83
                     68*****96..5*********66.....68*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
MEQRAAAAQQ QRQGRRQSAA ACGIRRARAE TRHPVYRGVR FRAGKWVSEI RELRKPSRIW  60
LGTYATPEMA AAAYDAAALA LRGRGAALNF PDAARSRPAP ASVSADDVRA AATAAAAAMA  120
HQEEDDDSRR QLEDGGGGGG VVDEDDVLEM PRLMVSMAEG LMISPPPVML GLQADGGGIM  180
DEGGGVVRLW DHS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.13e-15ERF family protein