PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA10G13970.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

WRKY

Protein Properties

Length: 290aa MW: 30428.1 Da PI: 6.5049

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA10G13970.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	106.7	1.2e-33	124	181	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk+s+fprsYYrCt ++C+vkk+vers++dp+vv++tYeg+H h+ ONIVA10G13970.1 124 EDGYRWRKYGQKAVKNSPFPRSYYRCTNSKCTVKKRVERSSDDPSVVITTYEGQHSHH 181 8********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 290 aa Download sequence
MAMAGAGDWP FAADEAYADS SAIFAELGWA NGLAVVDAVG ELLPPLDPPG ELATPPPPPL 60 DLPETPAGSS ADGAASSCST DDADGGKPAA ASTEAASKSL TPGKKRARQP RFAFMTKSEI 120 DHLEDGYRWR KYGQKAVKNS PFPRSYYRCT NSKCTVKKRV ERSSDDPSVV ITTYEGQHSH 180 HTVTFPRAAA TAAGFSHIHA MAALAAAPFS AHQQLYSNLQ PPPPTMPLAA TTPASSSSLL 240 QLPLHCNHEL QVVASCGGYP SSSSPPPASV LPVDKGLLDD MVPRAMRHDG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69310.2	2e-53	WRKY family protein

Link Out ? help Back to Top
Ensembl	ONIVA10G13970.1