PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA10G11610.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

GATA

Protein Properties

Length: 532aa MW: 57405 Da PI: 7.6397

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA10G11610.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	59.7	3.9e-19	69	102	1	34
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 C++Cgtt+Tp+WR+gp+g++tLCnaC ++yr+ + ONIVA10G11610.1 69 CRHCGTTETPQWRHGPEGHRTLCNACSVRYRSGK 102 *******************************976 PP
2	GATA	48.4	1.3e-15	241	274	1	34
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 C++CgttkTp WR gpd ++LCnaCG +y++ ONIVA10G11610.1 241 CAHCGTTKTPAWRLGPDSRRKLCNACGNKYQSGQ 274 ******************************9875 PP
3	GATA	47.6	2.2e-15	459	493	1	35
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C++CgttkTp W +gpd +LCnaCG yrk +l ONIVA10G11610.1 459 CTHCGTTKTPAWLSGPDSRGKLCNACGKQYRKGRL 493 ********************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 532 aa Download sequence
MVVVDGLHDG GGGDLKALLD DAGVDDVAAR GGGGGGGEVE EEVERPSNED AFPAVEKMAT 60 AAAAKGLQCR HCGTTETPQW RHGPEGHRTL CNACSVRYRS GKLVPEYRPL RCPTFSPELH 120 SNRHHRVLQL RRRPGPQSAA PSPAAVARCG GEAKEEEEEL AWVSNKDAFA TVETTMAPSP 180 RVVETPPEHD HRPANIPTTS PEPHSDRPRR VVQLPRRLQE PSASANLAHA VAATARAGRE 240 CAHCGTTKTP AWRLGPDSRR KLCNACGNKY QSGQLNSTTF SQNSQEQKKK SKSSACSRER 300 KRSVVAATVV VGGGLRDDAA AIADEHLDGG DLQALLDDVA LDDVAARGGG DAGEAKEEEE 360 ELEWLSNKDA FPTVETMSPA PPENRTKAPV PPAGWQCRHC GSTETPLWHE RDGPAEAEHV 420 RKEETPPNIS PATKHRRIVD LLRCSTALNT AATAVERRCT HCGTTKTPAW LSGPDSRGKL 480 CNACGKQYRK GRLVPEYRPL NCPTFSPELH SNAHAHRRRR ESPVAIAIAG EK

Sequence ? help Back to Top

Protein Sequence Length: 532 aa Download sequence

MVVVDGLHDG GGGDLKALLD DAGVDDVAAR GGGGGGGEVE EEVERPSNED AFPAVEKMAT  60
AAAAKGLQCR HCGTTETPQW RHGPEGHRTL CNACSVRYRS GKLVPEYRPL RCPTFSPELH  120
SNRHHRVLQL RRRPGPQSAA PSPAAVARCG GEAKEEEEEL AWVSNKDAFA TVETTMAPSP  180
RVVETPPEHD HRPANIPTTS PEPHSDRPRR VVQLPRRLQE PSASANLAHA VAATARAGRE  240
CAHCGTTKTP AWRLGPDSRR KLCNACGNKY QSGQLNSTTF SQNSQEQKKK SKSSACSRER  300
KRSVVAATVV VGGGLRDDAA AIADEHLDGG DLQALLDDVA LDDVAARGGG DAGEAKEEEE  360
ELEWLSNKDA FPTVETMSPA PPENRTKAPV PPAGWQCRHC GSTETPLWHE RDGPAEAEHV  420
RKEETPPNIS PATKHRRIVD LLRCSTALNT AATAVERRCT HCGTTKTPAW LSGPDSRGKL  480
CNACGKQYRK GRLVPEYRPL NCPTFSPELH SNAHAHRRRR ESPVAIAIAG EK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24050.1	3e-24	GATA family protein

Link Out ? help Back to Top
Ensembl	ONIVA10G11610.1