PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA10G08250.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 320aa    MW: 33993.1 Da    PI: 5.2297
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA10G08250.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.61.8e-19116166256
              AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                      +++GVr ++ +g+W+AeIrdp+    r  r++lg+f tae Aa+a++aa+++l+g+
  ONIVA10G08250.1 116 RFRGVRKRP-WGKWAAEIRDPV----RgVRVWLGTFPTAESAARAYDAAARRLRGA 166
                      69*******.**********63....56**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MSQTQSNSNQ THLPTPNPSR ARAMCGGAIL ADLIPSPRSG GHTKKNKRRR ISDDEDFEAA  60
FEEFDAGDDD SDSDSESEEV DEYDVVVDDD DSEDGVVVLP PPPPPVIPHE RHGARRFRGV  120
RKRPWGKWAA EIRDPVRGVR VWLGTFPTAE SAARAYDAAA RRLRGAKAKP NFPSAPPPSA  180
AAHRRKKRRA HAATRSPSSP PATSEVTAAS ASASSDVPAP AFASFVGEPG HGGAKSMPTT  240
SHTSQPAPPA TVASENVDDP EVFDPYDVHG GLASYFAGGA YESLESLFAH GGDSAAVDQA  300
ASDHWPAALW SFADDGSFCF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14751KRRRI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47520.15e-15ERF family protein