PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA10G07840.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

HD-ZIP

Protein Properties

Length: 301aa MW: 32506.5 Da PI: 4.8565

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA10G07840.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59.1	7.4e-19	61	114	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++ +eq+++Le+ Fe +++++ e+++++A+ l+L rqV vWFqNrRa++k ONIVA10G07840.1 61 KKRRLAAEQVRALERSFEADNKLDPERKARIARDLRLHPRQVAVWFQNRRARWK 114 4557899**********************************************9 PP
2	HD-ZIP_I/II	125.8	1.9e-40	60	152	1	93
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ekkrrl++eqv++LE+sFe+++kL+perK+++ar+L+l+prqvavWFqnrRAR+ktkq+E+d++aL++++dal+ e ++L++++++L++e+++ ONIVA10G07840.1 60 EKKRRLAAEQVRALERSFEADNKLDPERKARIARDLRLHPRQVAVWFQNRRARWKTKQIERDFAALRSRHDALRLECDALRRDKDALAAEIAD 152 69**************************************************************************************99875 PP

Sequence ? help Back to Top
Protein Sequence Length: 301 aa Download sequence
MKRPSCRGSS MAIIHDTSDQ QEDNMRSYMD GGGAAAYEEE EEEVEDDDGG GGGGGGGLGE 60 KKRRLAAEQV RALERSFEAD NKLDPERKAR IARDLRLHPR QVAVWFQNRR ARWKTKQIER 120 DFAALRSRHD ALRLECDALR RDKDALAAEI ADLRDRVDGQ MSVKLEAVAA DEHQPPPPPP 180 PPPLAYNSKV VDGSTDSDSS AVFNEEASPY SGAAIDHHHH QTPASYDTAG FTSFFAPSTT 240 LTSSLSFPSM FHASSHFDGH QELLVGGGGA GAVADADLGG AGFFAGDEHA GGLSWYGAEG 300 W

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	109	117	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G40060.1	1e-33	HD-ZIP family protein

Link Out ? help Back to Top
Ensembl	ONIVA10G07840.1