PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA10G06600.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family NAC
Protein Properties Length: 374aa    MW: 41826.4 Da    PI: 4.7795
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA10G06600.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM37.95.3e-127513269128
              NAM  69 atgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                      ++g+++  + k+gyWk  g+ +  +  ++  vg+k tL  y+g+ap+g++t Wvm+ey +
  ONIVA10G06600.1  75 KNGENAIIKSKTGYWKVVGTVRIPT--STVIVGMKVTLDHYEGEAPSGKRTGWVMDEYLI 132
                      345555557889*******966554..5899***************************75 PP
Sequence ? help Back to Top
Protein Sequence    Length: 374 aa     Download sequence    
MSAKIGSIFS RTIMSSKVPG LALLNTSISK FWSDEELVRF LAERKEAHSL PENVFVGMNI  60
SLIDPRNSDD PQSPKNGENA IIKSKTGYWK VVGTVRIPTS TVIVGMKVTL DHYEGEAPSG  120
KRTGWVMDEY LIEQNDEANL PQDYKNLCTI FFQGDDILNA GDKQICLNAN VPNERKEFYL  180
QYLAELEEQN AAWNNQAVSV NEQDVSSSKG LDGQKTSAAD DQSVNHAPSR EGYIELNDFL  240
NSDSSASTSE YSSQRTMISE EYFDSDAFLR EIRNDHNAAD EEHTDSKFSV AAASKSDCVV  300
ISPPEQGFVN NLDNHATIAG DSPQKSVKND KVDEHSRSMT LRHAILIRTG RLNRFMPDLL  360
IEHSQRRLQV LKQQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.14e-13NAC family protein