PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA09G17880.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | ERF | ||||||||
Protein Properties | Length: 218aa MW: 23238.9 Da PI: 4.8485 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 46.9 | 7e-15 | 31 | 87 | 1 | 55 |
AP2 1 sgykGVrwdkkrgr......WvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr++ gr Wv+e+r+p g + r +lg+f tae Aa+a++aa+++l+g ONIVA09G17880.1 31 PVYRGVRRRG--GRpgaagrWVCEVRVP---GaRGSRLWLGTFATAEAAARAHDAAALALRG 87 679***8765..55556666*******9...6666*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 218 aa Download sequence |
MEVEEAAYRT VWSEPPKRPA GRTKFRETRH PVYRGVRRRG GRPGAAGRWV CEVRVPGARG 60 SRLWLGTFAT AEAAARAHDA AALALRGRAA CLNFADSAWR MPPVPASAAL AGARGVRDAV 120 AVAVEAFQRQ SAAPSSPAET FADDGDEEED NKDVLPVAAA EVFDAGAFEL DDGFRFGGMD 180 AGSYYASLAQ GLLVEPPAAG AWWEDGELAG SDMPLWSY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25480.1 | 7e-13 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA09G17880.1 |