PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA09G17010.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family NAC
Protein Properties Length: 245aa    MW: 26068.2 Da    PI: 9.8825
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA09G17010.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM118.65.8e-3781411128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpkkvkaeekewyfFskrdkkyat..gkrknratksgyWkatgkdke 91 
                      lppGfrFhPtdeelvv+yL++++ +++l++  vi++v d + ++PwdLp    a++ e yfFs r+ ++a+  g  ++r + sgyWkatg +k+
  ONIVA09G17010.1   8 LPPGFRFHPTDEELVVQYLRRRALSRPLPA-AVIPDVhDATVLDPWDLP---GAGDGEAYFFSFRQLAAASggGGWRRRRAGSGYWKATGAEKP 97 
                      79****************************.8999999***********...457889*******999986324456666799*********** PP

              NAM  92 vlsk.........kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      v+ +         +++lvg+k+tL f +++ p+  +t+Wvmheyrl
  ONIVA09G17010.1  98 VFLRgfgcgggggGQHLVGVKTTLLFLRAKPPS--RTHWVMHEYRL 141
                      ****9999999887888**********666666..*********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MATPGQQLPP GFRFHPTDEE LVVQYLRRRA LSRPLPAAVI PDVHDATVLD PWDLPGAGDG  60
EAYFFSFRQL AAASGGGGWR RRRAGSGYWK ATGAEKPVFL RGFGCGGGGG GQHLVGVKTT  120
LLFLRAKPPS RTHWVMHEYR LAAAGAVAVA AAGQTKRGNH SCMAQPGEWV VCRIFLKNNR  180
SSRRRAGDAD GETPVTGVHG HRWRQPSPSP SSSSCVTAEV SDGEGEEEVS SGSINGAPSA  240
SQREA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.13e-32NAC family protein