PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA09G09150.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

MYB_related

Protein Properties

Length: 538aa MW: 60788.6 Da PI: 9.6493

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA09G09150.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	23.2	1.6e-07	350	391	2	40
SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqc 40 ++W eE ell +a++++++g +W+ +++ +g+gR+ +++ ONIVA09G09150.1 350 KPWGREEIELLRKAIQKYPKGtsrRWEVVSEFIGTGRSVEEI 391 68***********************************99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 538 aa Download sequence
MALKHHPDKQ ASLILAEATE EAKQAKKDEI ESHFKAIQEA YEVLIDPTKR RIFDSTDEFD 60 DDIPTDCAPQ DFYKVFGPAF MRNGRWSVNQ TIPSLGDDAT PVEEVDKFYN FWYNFKSWRE 120 FPHADEYDLE QAESREHKRW MERQNAKLQE KAKKVEYARV RTLVDNAYKK DPRIQRRKEE 180 EKAEKQRRKE AKYLAKKMQE EEAAKAAEEE RKRKEEEAKR AAEAALNQKK LKEKEKKLLR 240 KEKTRLRNLV APVVAESHFS LSEDDVETAC SSLDMERLKK LCDSMENKDT TEKARLLRGA 300 LSKEGSSGTS NEGKKIQANG VDGSKAKSTS SGEKVTQGNT LSNYEKKEEK PWGREEIELL 360 RKAIQKYPKG TSRRWEVVSE FIGTGRSVEE ILKATKTVLL QKPDSTKAFD SFLEKRKPAP 420 SIASPLSVRT ETVGLPTEKA SGDASSKAPA QPASSKTSDE KAPAPAPVSN GTPSGTADPE 480 AWSEAQVLAL VQALKAFPKD ASQRWERVAA AVPGKTMVQC KKKVAEMQKN FRSKKGAE

Sequence ? help Back to Top

Protein Sequence Length: 538 aa Download sequence

MALKHHPDKQ ASLILAEATE EAKQAKKDEI ESHFKAIQEA YEVLIDPTKR RIFDSTDEFD  60
DDIPTDCAPQ DFYKVFGPAF MRNGRWSVNQ TIPSLGDDAT PVEEVDKFYN FWYNFKSWRE  120
FPHADEYDLE QAESREHKRW MERQNAKLQE KAKKVEYARV RTLVDNAYKK DPRIQRRKEE  180
EKAEKQRRKE AKYLAKKMQE EEAAKAAEEE RKRKEEEAKR AAEAALNQKK LKEKEKKLLR  240
KEKTRLRNLV APVVAESHFS LSEDDVETAC SSLDMERLKK LCDSMENKDT TEKARLLRGA  300
LSKEGSSGTS NEGKKIQANG VDGSKAKSTS SGEKVTQGNT LSNYEKKEEK PWGREEIELL  360
RKAIQKYPKG TSRRWEVVSE FIGTGRSVEE ILKATKTVLL QKPDSTKAFD SFLEKRKPAP  420
SIASPLSVRT ETVGLPTEKA SGDASSKAPA QPASSKTSDE KAPAPAPVSN GTPSGTADPE  480
AWSEAQVLAL VQALKAFPKD ASQRWERVAA AVPGKTMVQC KKKVAEMQKN FRSKKGAE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	211	232	RKRKEEEAKRAAEAALNQKKLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11450.1	1e-166	MYB family protein

Link Out ? help Back to Top
Ensembl	ONIVA09G09150.1